Protein

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Genbank accession
AUS00331.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSDLDNAINSINASAAKAENTATFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTAAESDINQAVSDAEQSATDAQDAADSIGRYQGLWPDTGGSADKGDTYQTQVGGTPTGQYFTALQNTIADPVGDDVNWRGVVSVESINTYCDISYKSADGLSSIENMVTGNPLTAKVGDICGTKGMQWERVSVSSPDSLDDFRPLTPVTPSSWGLNEVGFNNADAIQSALEYCHDNNTSFIGPNVEVETDKTIFLPNFPSFDNYQVIDFGGMVIRPDDTVFKPMQSGKRVGGVWESAMSDPLQTNMTFNTKLTGLVFVRDDPETKDGRVALEIKDWHQSCELETLIARNFQTALDSYNNFYLNYGNLKLQNAALASGERTGIGFIFRTAVNLNNIKQLVSQNVDTGYVVDGLVTALHIETISLEGQNHGLITTGEVRGMTVSGTYGEYNVTDSEEFFDFQGPVYNVAIDGCYFTSSNANTWIIKSISSPRSAIMFGKNNNLAGTLDETRVFENKGYGYRTLGSPSESQGSDIDGILMRESDLGVGTVVDKYAVDVYVGDATYSVAMVHNEIIPANYSGRMTRGFNSNRQPGLYGFTFDQVAGEAKLSTRILYSSTQYIRAAIRVNDFASTKEFFFEIHGDNVYNIDRTVSPDVSFSTAADGTIELTISGLSTGGGATLSGGEIRVI
Physico‐chemical
properties
protein length:687 AA
molecular weight: 74445,05510 Da
isoelectric point:4,35179
aromaticity:0,09316
hydropathy:-0,31237

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil
DC_0090
STR
1–686
DC_0090
AUS00331.1
1 687
Architecture
STR
STR 1-686 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS00331.1
1 687
Domain Start End Length (AA) Confidence
N-terminal 1 222 222 0,9888
Central domain 223 549 328 0,9750
C-terminal 550 687 137 0,9560
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-222
Central
223-549
C-terminal
550-687

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.273.O._10N.286.54.C7
[NCBI] 		1881275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS00331.1 [NCBI]
Genbank nucleotide accession
MG592641.1 [NCBI]
CDS location
range 31830 -> 33893
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAATTCAATTAACGCATCAGCAGCTAAGGCAGAAAATACCGCTACCTTTCTGGATGACATGTCTACGTTTGACGACCAATCAAGCGTAACTAACCCAAACAACGGGCAAACTGTTGCGTCTATTCCTAAACAAGTAAAAGATCGAACAGATGAGCTATTTACCGCTGCTGAGTCGGATATCAACCAAGCGGTGTCTGATGCAGAGCAAAGCGCAACAGATGCACAAGATGCTGCGGATAGTATTGGCCGTTATCAAGGCTTATGGCCCGACACGGGCGGCAGTGCTGACAAAGGTGATACATATCAAACTCAAGTGGGCGGCACGCCTACAGGTCAGTATTTTACGGCCCTACAAAACACAATAGCCGATCCGGTTGGGGATGATGTGAATTGGCGTGGGGTTGTTAGCGTTGAAAGTATCAATACGTATTGTGATATATCCTACAAAAGTGCAGACGGGTTATCTTCAATTGAAAATATGGTGACGGGGAATCCACTAACTGCCAAAGTTGGAGATATCTGTGGGACAAAAGGCATGCAATGGGAAAGGGTTTCAGTATCAAGCCCCGACTCTCTTGATGACTTTAGGCCGCTAACACCCGTAACACCATCATCTTGGGGGCTTAATGAAGTTGGTTTCAATAATGCCGATGCCATACAGTCGGCGCTCGAATACTGCCATGATAACAACACCTCGTTTATCGGTCCAAACGTTGAGGTTGAAACAGATAAAACTATATTTTTACCAAACTTCCCATCTTTTGATAATTACCAAGTTATTGATTTTGGAGGAATGGTAATAAGACCTGATGACACGGTATTTAAACCTATGCAGTCAGGTAAAAGAGTTGGCGGGGTTTGGGAAAGTGCAATGAGCGATCCATTGCAAACAAATATGACCTTCAACACTAAACTTACTGGTCTGGTATTTGTTCGTGATGACCCAGAAACAAAAGACGGCCGCGTAGCTTTAGAGATTAAGGATTGGCATCAATCATGCGAGCTGGAAACGCTTATTGCCAGAAACTTCCAAACAGCATTAGATAGTTATAATAACTTTTACCTTAACTATGGAAATCTAAAACTACAAAATGCAGCTCTAGCATCTGGCGAAAGGACTGGTATTGGGTTTATATTCAGAACAGCCGTTAACCTCAACAACATCAAGCAATTAGTATCTCAAAATGTAGATACTGGTTACGTAGTTGATGGTTTGGTCACCGCTCTTCATATAGAGACAATATCGCTTGAGGGGCAGAATCACGGACTTATAACTACTGGAGAAGTTCGAGGAATGACAGTTAGCGGAACGTATGGTGAGTATAATGTTACCGATAGTGAGGAATTCTTTGACTTTCAAGGTCCAGTGTATAATGTTGCAATTGACGGATGCTATTTCACATCAAGCAATGCAAACACGTGGATTATTAAGTCAATATCAAGCCCAAGATCTGCAATAATGTTCGGTAAAAACAACAATCTTGCCGGCACTCTTGATGAGACTAGGGTTTTTGAAAACAAAGGTTACGGATACAGAACGCTAGGATCTCCATCTGAATCTCAGGGGAGTGATATTGATGGAATTCTAATGCGAGAGTCAGACCTTGGGGTTGGGACTGTTGTTGATAAATATGCAGTAGACGTTTACGTTGGTGATGCTACATATAGCGTAGCGATGGTTCACAATGAAATAATACCAGCAAACTACTCAGGACGAATGACCAGAGGATTTAACTCTAACAGGCAGCCTGGTCTTTATGGGTTCACTTTCGACCAGGTGGCTGGAGAGGCGAAATTATCAACTAGGATATTATACAGTAGCACTCAGTACATAAGAGCTGCAATTCGCGTCAATGACTTTGCGTCAACAAAAGAATTCTTTTTTGAGATTCACGGTGATAATGTTTACAACATTGACAGAACTGTTAGTCCTGATGTTTCTTTTTCAACCGCAGCTGATGGAACTATAGAGCTTACCATTTCTGGGTTATCTACAGGTGGTGGGGCAACCCTTTCTGGAGGAGAAATTAGGGTTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8deeb41eea1d9f75fd3b0ce0c2694d25b3dfa7f8f57e8a1b89f7cbb0088395c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank