Protein

View in Explore
Genbank accession
UYE95744.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAITAAEAFRDYETDGVPSSGSHKIKKSDMRSWGAWVEGIITAFTSNGGLIFTLKSNMDAVLTHGPATMAWVIGDPVTANNGVYQKIGNSGTGSWVRRADLPYSFIIASDAGAGTPNAIQATTSIPVSASALIWMNVFEANTASPVTVSFNGDTPLTIKTNSGNNIVAGGLTAGMIVLGIVSGSTFRLVSDQASAAIVAAAEAAADRAEAAAAGLERMPIAPEAYGALHNGSDDKVAIENAAAAAVAQNRSLLLSKGRTYTFSSLVLPAGLSMVGDGALRHDGTTAAGDIITIGVNSVIDNLIYSTPAHGNGIWDVRIGDGARIGYLETIADAQTQGETVATTGDNVWIGFHRAENMDRPLHVDNSAGASLTSGFYLGGHDYTSYIRGIKLSATADWFIGNGRQSVRSANGIDESPGYNNLLLASAPRGRVAGAVWEDAPEHSVRVGGNIGPGLVDTSDLAFGPLVVKRCSASAVKLNPNYTGRARRIHFESITGVDVGYTTGSTAKRSDGLRLSHCEDITFGTVDFVVDQLATSSEVALRLNNAKNIVIGHLGARFVESGILAIDETADIDSGQGATQSGDVTSIHINSLVAAKGAGTYPFSFALPNHNMGDIRIRGMDVNGLTTGLAAFAATTTLTDIIEFQGRVSASSSASFSNLPANDSVRLDLRINGKHYFGPARQLIANTASLTIGSEPFTLDASTQLGAVFAQTQTGTATLGAYSTGYLASRSGPSGRRGVGWVGKQTGASSQNMGFAIVLNAGTGGSDVFVDGFIVNHDKSISHYPPASVTPTVNGEMTIQLTSNTSLTFKVKGSDGVVRSGSVTLA
Physico‐chemical
properties
protein length:825 AA
molecular weight: 85338,23870 Da
isoelectric point:5,72581
aromaticity:0,06788
hydropathy:0,02509

Domains

Domains [InterPro]
DC_1788
STR
24–503
DC_1788 DC_0394
Coil
Unmapped
198–218
Coil IPR011050
UYE95744.1
1 825
Architecture
STR
RBD
STR 24-529 | RBD 555-825
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE95744.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,9847
Central domain 235 678 445 0,9883
C-terminal 679 825 146 0,9473
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-678
C-terminal
679-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage AP-16-3
[NCBI] 		2985443 No lineage information
Host Sinorhizobium meliloti
[NCBI] 		382 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE95744.1 [NCBI]
Genbank nucleotide accession
OP484857.1 [NCBI]
CDS location
range 17756 -> 20233
strand +
CDS
ATGGCCATCACCGCAGCAGAGGCCTTCCGCGACTACGAAACTGATGGTGTGCCGTCGTCTGGGTCGCATAAGATTAAAAAGAGCGACATGCGCTCGTGGGGCGCATGGGTCGAAGGAATTATCACTGCGTTCACGTCGAACGGCGGCCTGATCTTCACGCTCAAGTCCAATATGGACGCAGTGCTGACTCACGGTCCAGCGACTATGGCATGGGTCATCGGTGACCCCGTAACCGCCAACAATGGCGTCTACCAGAAGATCGGGAATTCCGGAACCGGGTCTTGGGTGCGGAGAGCTGACCTCCCGTACAGCTTTATCATTGCTTCAGATGCCGGGGCGGGAACTCCGAACGCCATCCAGGCGACGACGAGCATTCCGGTGTCGGCCTCTGCGCTGATCTGGATGAATGTTTTCGAGGCTAACACCGCGAGCCCGGTAACCGTCAGTTTCAACGGCGACACGCCGCTGACGATCAAGACGAACTCCGGCAATAACATCGTCGCTGGCGGGCTCACCGCAGGTATGATTGTTCTAGGCATTGTGTCGGGATCAACGTTCCGTCTGGTAAGCGACCAGGCGAGCGCGGCGATTGTTGCTGCCGCTGAGGCCGCGGCTGATCGAGCCGAGGCGGCTGCGGCTGGGCTGGAGCGCATGCCGATCGCGCCGGAGGCGTACGGCGCACTTCACAACGGCTCCGATGACAAGGTCGCCATAGAGAATGCCGCCGCCGCAGCCGTTGCGCAAAATAGGTCGCTGCTCCTATCGAAGGGACGAACCTATACGTTCTCGAGCCTGGTGCTTCCTGCTGGCCTCAGTATGGTTGGCGATGGAGCTCTTCGCCATGATGGCACCACGGCGGCTGGCGACATCATCACGATTGGCGTTAACAGCGTCATAGACAATCTGATCTACAGCACGCCCGCGCACGGAAATGGCATCTGGGATGTGCGTATCGGTGACGGAGCGCGCATTGGGTATTTGGAGACGATCGCTGACGCCCAGACCCAGGGCGAGACGGTAGCCACGACTGGCGACAATGTCTGGATCGGTTTCCATCGCGCCGAAAATATGGATCGCCCTCTGCATGTCGACAACAGCGCCGGCGCGTCCCTTACAAGCGGGTTTTATCTCGGAGGCCACGATTACACGTCCTATATTCGCGGAATCAAGCTGTCGGCAACAGCGGATTGGTTCATCGGCAATGGAAGGCAAAGCGTTCGGAGCGCCAACGGCATTGACGAATCCCCCGGTTACAACAATCTGCTCCTGGCCAGTGCCCCAAGGGGCAGGGTAGCGGGAGCCGTATGGGAGGACGCTCCAGAGCACTCGGTTCGCGTCGGTGGCAACATAGGACCAGGCTTGGTTGACACGAGTGATTTGGCGTTCGGACCCTTGGTCGTTAAGAGATGCTCCGCATCGGCCGTAAAACTCAACCCGAATTACACGGGCCGAGCAAGGCGGATACATTTCGAAAGCATCACCGGCGTTGACGTGGGATATACGACGGGGAGCACGGCGAAGCGATCCGACGGTCTGCGTCTGTCGCACTGCGAGGACATCACCTTCGGGACCGTCGACTTCGTAGTAGATCAGCTCGCGACATCGTCGGAAGTGGCTCTGCGGCTCAACAACGCGAAGAACATTGTCATCGGACACCTTGGTGCTCGCTTCGTCGAAAGCGGAATTCTTGCCATTGATGAAACAGCGGACATCGACAGCGGCCAGGGCGCAACGCAAAGCGGCGATGTCACCAGCATTCACATCAATTCGCTTGTGGCAGCGAAGGGCGCCGGAACCTATCCGTTCAGTTTCGCTCTGCCGAACCACAACATGGGCGATATCCGTATCCGCGGTATGGATGTGAACGGCCTTACAACCGGTCTGGCGGCTTTCGCCGCTACAACCACGCTGACTGACATCATCGAGTTTCAAGGTCGCGTCTCGGCGTCGTCGTCGGCATCGTTCAGCAACCTGCCGGCGAACGACAGCGTGCGGCTGGACCTGCGCATAAATGGGAAGCACTACTTCGGTCCCGCGCGCCAGCTCATTGCCAACACTGCCTCCCTTACGATTGGCTCTGAGCCATTCACGCTCGACGCATCAACGCAGCTGGGCGCGGTGTTTGCCCAAACTCAAACCGGAACGGCAACGCTCGGTGCCTACAGCACAGGCTACCTTGCATCGCGCTCAGGGCCTTCCGGCCGACGCGGCGTTGGATGGGTGGGGAAGCAGACCGGGGCAAGCTCCCAGAACATGGGGTTTGCCATTGTTCTGAACGCGGGGACTGGGGGCAGCGACGTTTTTGTCGATGGTTTTATCGTCAATCACGACAAGAGCATCAGCCACTACCCGCCGGCCTCTGTTACGCCTACCGTAAACGGAGAGATGACTATCCAGCTCACCAGCAACACGTCCTTGACATTCAAGGTCAAGGGCTCGGACGGGGTGGTAAGGTCGGGATCGGTCACGTTGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b6e240abf3e5675ba6cb02e302cd55ab6bc6b7f95dee9c634928fdf143d9e62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7869
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genome sequence of an Ensifer meliloti phague Afonin,A., Muntyan,V., Kozlova,A., Saksaganskaia,A., Vladimirova,M. and Roumiantseva,M. 2019-01-10 — GenBank