Protein

View in Explore
Genbank accession
WBF05218.1 [GenBank]
Protein name
tail fiber protein 3
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MALKLSNNAVGFLAGTLDPDSTTLALQPGQGAAFPVLSAGDWCPGTLVHSSGAVEVVRVIARSSDTFTIERAQEGTGPQQFNPGDRFEHRLTAGALMSIVGDVDGLSAAIARIQPRVGDLKIWTGAIADIPAVHGPGWYLADGQHGTIDLRDKFIVAAGGSYAPGNTGGAATVALTAAQMPQHNHGVNDPGHAHGVNDPSHAHSVYDPGHTHSHNTAALVQSSTGGGAFPINGYSGGTISGAYTGISIYGAYSGISIQGAGTGISTQNAGSGAAHENRPPYYALAIIQYVGA
Physico‐chemical
properties
protein length:292 AA
molecular weight: 29609,37180 Da
isoelectric point:5,89468
aromaticity:0,06849
hydropathy:-0,05411

Domains

Domains [InterPro]
DC_0891
STR
1–292
DC_0891
cd22641
STR
96–190
cd22641
SSF88874
STR
136–285
SSF88874
WBF05218.1
1 292
Architecture
STR
STR 1-292
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage CSP3
[NCBI] 		3017166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia contaminans
[NCBI] 		488447 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF05218.1 [NCBI]
Genbank nucleotide accession
OQ053201.1 [NCBI]
CDS location
range 20053 -> 20931
strand +
CDS
ATGGCTCTCAAGCTCTCCAACAATGCGGTCGGCTTTCTCGCCGGCACGCTTGATCCCGACAGTACGACGCTCGCGCTGCAACCCGGACAGGGCGCAGCGTTTCCCGTTCTTTCCGCTGGCGACTGGTGCCCCGGAACGCTGGTGCACTCGAGCGGTGCTGTCGAGGTCGTGCGCGTTATCGCGCGCAGCAGCGACACCTTTACTATCGAACGTGCGCAGGAAGGCACGGGCCCGCAGCAGTTCAACCCCGGCGACCGCTTCGAACATCGGCTCACGGCCGGCGCGCTGATGTCGATCGTCGGCGACGTCGACGGCCTGTCGGCCGCGATTGCGCGGATTCAGCCGCGCGTCGGCGACCTGAAAATCTGGACGGGCGCTATCGCAGACATCCCGGCCGTGCATGGTCCGGGCTGGTATCTGGCGGACGGGCAGCACGGCACCATCGACCTGCGCGACAAGTTCATCGTCGCGGCGGGCGGCTCTTACGCACCCGGCAACACCGGCGGCGCCGCGACCGTCGCGCTGACCGCGGCGCAGATGCCGCAGCACAATCACGGCGTCAACGACCCCGGCCACGCGCACGGCGTGAACGATCCGTCGCACGCGCACAGTGTCTACGATCCGGGCCACACGCACAGCCACAACACCGCTGCCTTGGTTCAATCGAGCACGGGCGGCGGCGCGTTCCCAATCAACGGCTATTCCGGCGGCACGATCAGCGGCGCCTACACCGGCATTTCGATCTATGGGGCTTACTCCGGGATCAGCATTCAGGGCGCGGGAACGGGGATCAGCACGCAGAACGCCGGCAGCGGCGCCGCACACGAAAACCGGCCGCCCTACTACGCCCTCGCCATCATCCAGTACGTCGGAGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
078c2babac492df816eb68fb7672361a6e5308007150ff00f3bfaa57d2fe1d8a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8123
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Burkholderia contaminans bacteriophage CSP3 requires O-antigen polysaccharide for infection Stanton,C., Batinovic,S. and Petrovski,S. 2023-06-15 — GenBank