Protein

View in Explore
Genbank accession
YP_005098420.1 [GenBank]
Protein name
EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAKSLVGATTALFVVRLSTPVTEKVTVAWQTEDGTGHAGIDYEAAAGTVEFAPGETEKGIEVVVLGREDGSTGNGLTFYVRLRPPVNAVLLDELNECRITVETDEGVVTTSVVVATGPKGKKGDPGLSAYELAKVQGYEGSLTDWLGGAGVQAVVMASQAAAQAKEQLNRAFRFEPGNKVPELPPIEQMEGKIVVVRNGAPVGMQASNDTALGLAVNLGKNDGSSMVGHTDKADGKAKTVGATLDRLVDEDAAQKKTAQDRQDALNSAMGFSQIGQVPSWAALATVVPTKADQQVILRGWNAGSTHGGGIFKAVAGAATSDGGTVCPVNGNWYWKRVQEDALLTIYDFGARVDGVTDDMPAIKAMYEATRKNAVANPVGVRLPAGPVGVSGTMDLSGSTEQSIFRLKGPDVEFGVVPVTKIIPLDKTSTVPLFQLNARRMEVSGLHIDTTTDNVKPFLKNVCPRGEYVRVKCVRVNNSAGLTFDLVDTIDTKFEQVYAYSISGGFLRTSWSNLDPGGWNHPTAIEISNANFSSSKKVEPIRAIRAGQSIMRNVWFSNNEYTFDISQGGWLFDTVIMENSTYPAKIKYAKIFKTNCRFEQGATLDENGTDFDPSWDQGKPLPTWVTNAMDQGGVDLRITGSRFDCGVSTQFDFSETILTNTTSAEKWVEVGKVILQDRGRTCRMSLLGTSGWNSAAGEMKVPAGTGFGGGRSDIFIECKVPDSQDTGVIEVHWHGEGASPIQDVKYTRSWQTVTIYVKMAAYCLSAALFIESNGLSRAQTGKPFYTQLTNVDVADIGAVPGIKQASARWSVNRGVYNDNGFGMDLDTGDLLLYTKLKMSKGAADFIPIMLNGERFYIQATDKFANRVPYYTFDQLPSPSDYVYCQVLCSDTAKSPSMQMLYSNGYRWIYQAYPTETVTKIADGSPIINR
Physico‐chemical
properties
protein length:928 AA
molecular weight: 100179,88330 Da
isoelectric point:5,36545
aromaticity:0,08621
hydropathy:-0,21552

Domains

Domains [InterPro]
IPR038081
ATT
4–105
IPR038081 DC_0717 DC_0716
IPR038081
ATT
7–107
IPR038081 IPR011050
IPR003644
ATT
10–82
IPR003644 IPR012334
YP_005098420.1
1 928
Architecture
ATT
ATT
STR
ATT 4-107 | ATT 245-365 | STR 366-865 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_005098420.1
1 928
Domain Start End Length (AA) Confidence
N-terminal 1 358 358 0,9969
Central domain 359 661 304 0,9927
C-terminal 662 928 266 0,6422
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-358
Central
359-661
C-terminal
662-928

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage PEp14
[NCBI] 		1131315 Uroviricota > Caudoviricetes > Pavtokvirus >
Host Erwinia pyrifoliae
[NCBI] 		79967 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_005098420.1 [NCBI]
Genbank nucleotide accession
NC_016767 [NCBI]
CDS location
range 13920 -> 16706
strand +
CDS
ATGGCTAAGAGCCTTGTGGGGGCTACCACCGCCCTGTTTGTTGTCAGACTGTCAACGCCCGTCACTGAAAAGGTAACAGTGGCATGGCAGACAGAGGACGGTACCGGTCACGCCGGCATTGACTACGAGGCCGCTGCCGGCACCGTGGAATTTGCGCCGGGCGAGACAGAAAAGGGGATCGAGGTTGTCGTGCTCGGCCGTGAGGACGGCTCAACGGGCAACGGCCTGACCTTCTACGTTCGTCTGCGTCCGCCGGTGAATGCCGTGCTGCTGGACGAGCTGAACGAGTGCCGCATCACTGTGGAAACCGACGAAGGCGTGGTGACGACCTCTGTTGTCGTCGCGACCGGGCCGAAGGGTAAGAAGGGCGATCCGGGCCTGAGCGCCTACGAGCTGGCGAAGGTTCAGGGCTACGAGGGCAGTCTGACCGACTGGCTGGGCGGTGCCGGCGTGCAGGCTGTTGTCATGGCCTCACAGGCGGCCGCACAGGCGAAAGAGCAGCTGAACCGCGCTTTCCGCTTCGAGCCGGGTAATAAGGTGCCGGAGCTGCCGCCTATCGAGCAGATGGAAGGCAAGATCGTCGTTGTCCGCAACGGTGCGCCGGTGGGGATGCAGGCGAGCAACGACACCGCGCTCGGCCTGGCCGTGAACCTCGGTAAGAACGACGGCTCCAGCATGGTGGGCCACACCGACAAAGCGGACGGCAAAGCCAAGACGGTAGGCGCAACCCTCGATCGGCTGGTGGATGAGGACGCAGCTCAGAAGAAAACCGCACAGGACCGTCAGGACGCGCTGAACAGTGCGATGGGCTTCTCGCAGATCGGGCAGGTTCCATCATGGGCGGCGCTGGCTACCGTGGTGCCGACCAAGGCCGATCAGCAGGTCATTCTGCGCGGCTGGAATGCTGGCTCTACCCACGGCGGCGGCATCTTCAAGGCTGTTGCAGGTGCGGCCACCAGCGATGGCGGTACCGTGTGCCCGGTCAACGGCAACTGGTACTGGAAGCGCGTGCAGGAAGATGCGCTGCTGACCATCTACGACTTCGGCGCCCGCGTCGATGGCGTCACCGATGACATGCCGGCAATCAAGGCGATGTACGAGGCGACCCGTAAAAACGCCGTGGCGAACCCGGTAGGCGTCCGTCTGCCAGCTGGTCCGGTTGGTGTGTCGGGAACGATGGACCTTTCGGGCAGCACCGAGCAGTCGATCTTCCGCCTGAAGGGGCCAGACGTCGAGTTCGGCGTGGTGCCGGTGACGAAGATTATTCCGCTCGACAAAACCAGCACCGTGCCGCTGTTCCAGCTGAACGCACGCCGTATGGAAGTGAGCGGCCTCCACATCGACACGACCACCGACAACGTGAAGCCGTTCCTGAAGAACGTGTGCCCGCGTGGTGAGTACGTTCGCGTGAAGTGCGTCCGCGTCAACAACTCCGCAGGCCTGACGTTCGACCTCGTGGACACCATCGACACCAAGTTCGAGCAGGTCTACGCCTACAGCATTTCCGGCGGCTTCCTGCGCACCAGCTGGTCAAACCTCGATCCGGGCGGCTGGAACCACCCGACCGCTATCGAAATCTCGAATGCGAACTTCTCCAGCTCGAAGAAGGTGGAGCCAATCCGCGCCATTCGTGCCGGCCAGTCGATCATGCGCAACGTGTGGTTCTCGAACAACGAATACACCTTCGACATTTCTCAGGGTGGCTGGCTGTTCGATACCGTCATCATGGAAAACAGCACCTATCCGGCCAAAATCAAGTACGCCAAGATTTTCAAGACAAACTGCCGTTTCGAGCAGGGTGCGACACTTGATGAGAACGGTACCGACTTCGACCCATCATGGGATCAGGGTAAACCTCTGCCGACGTGGGTAACGAACGCCATGGATCAGGGCGGCGTTGACCTGCGTATCACCGGCTCACGCTTCGATTGCGGCGTGTCCACGCAGTTCGATTTCTCCGAAACCATCCTGACCAACACCACCAGCGCTGAGAAGTGGGTGGAAGTAGGCAAAGTCATCCTTCAGGACCGTGGCCGCACCTGCCGCATGAGCCTGTTGGGTACGTCAGGCTGGAACAGTGCAGCCGGCGAGATGAAAGTGCCAGCCGGTACCGGCTTCGGCGGCGGCCGCAGCGACATCTTCATCGAGTGCAAGGTGCCGGACTCGCAGGACACCGGCGTGATCGAGGTTCACTGGCATGGCGAAGGCGCAAGCCCTATCCAAGACGTGAAGTACACCCGCTCATGGCAGACGGTCACGATCTACGTGAAGATGGCGGCCTACTGCCTGAGCGCGGCCCTGTTCATCGAGAGCAATGGCCTGTCTCGTGCGCAGACCGGCAAGCCGTTCTACACGCAGCTGACCAACGTTGACGTTGCCGACATCGGCGCGGTGCCGGGCATCAAGCAGGCCTCCGCGCGCTGGTCCGTCAACAGGGGCGTTTACAACGACAACGGCTTCGGCATGGATTTAGATACCGGCGATCTGCTGCTGTACACCAAGCTGAAGATGAGCAAAGGCGCGGCAGACTTCATCCCGATCATGCTGAACGGCGAGCGCTTCTACATTCAGGCAACGGACAAATTCGCGAACCGCGTGCCGTATTACACCTTTGACCAACTGCCTTCACCTTCGGATTACGTCTACTGTCAGGTACTATGTTCTGACACGGCGAAAAGCCCATCCATGCAGATGCTGTATTCCAACGGCTACCGCTGGATTTATCAGGCCTATCCGACCGAAACCGTCACTAAAATTGCCGATGGTAGCCCCATCATCAACCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e370caeab0a1944ab032eaaa4025e8400459e69e50c8da8c2b4a6a3d2de3a711
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6399
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50