Protein

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Genbank accession
YP_009008081.1 [GenBank]
Protein name
transmembrane protein
RBP type
TSP
Evidence DepoScope
Probability 0,80
Protein sequence
MMRVTRKTIFLIVLFLVFFILPFFLLTTKASLIQEEVPISVNVNTNISQGLIYIAPLPQQTQVFGQNYYVSNSLGYYEYSYLFSATPPLLVWYEPAPSSQTYYFVYGGNTQASAVTTGVFSFYTQFYYLNTSIFNVSDVSLLGGSLVLNGQNSLVTFTTTALRYTSAVILYTLQSSALVTPHELIYSGSIPSGSIVTLSLFSFSNLQTIPSYIAFPFGSTTWVMASDGYVKSSQFTISNSQFTYNAQVAGMPNEEVAQVALPQSSAMYGLVFRSSVSLQYPSAEYLAPQTVAPPSITFNGTFAVSQSGSYGYNSVLLENPVYFFDPTLLNGSNILVYNNSKWYSLPVQVSNLKLDLNHIGMYILPYNSSSNYIFFEDIPVGSVISVRYANGTIYSFTASGNTVNTVGGVSLVNLKIYGRNVIGISIQPSLTNTQVNYNMLVGFSDFLHKGGLIINTTGVYVYNSQTVVTKLVNNPRFPADVGVGYADIGNTFYLIGFYYYPGSFYTFITPMSNPVASTGIVPYINYNGTIPLSVSSIGITLSSGLYYETTSIVTVATGLPAPLQSSVISLTTAPGDALVNNNNAIYQTKLTNSSSSLTLIGFAGYNLVIQYGSIQSQLIISNNYYPTNLPTNLQVVVTVSESSRTITISTSPLPVKPVQVASLNVTNTTTVTYNGSSGSSFITNIHTTNNQLIGIITYYSFLAIAVASYRYSSQLWSSTLFLSFATLSIGLLFADYTILPFSIGAVILGFIFKRLNL
Physico‐chemical
properties
protein length:757 AA
molecular weight: 82457,69880 Da
isoelectric point:6,42385
aromaticity:0,14003
hydropathy:0,35086

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009008081.1
1 757
Domain Start End Length (AA) Confidence
N-terminal 1 252 252 1,0000
Central domain 253 567 316 0,0000
C-terminal 568 757 189 0,0010
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-252
Central
253-567
C-terminal
568-757

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfolobus monocaudavirus SMV1
[NCBI] 		1351702 Viruses > Viruses incertae sedis > Bicaudaviridae >
Host Sulfolobus solfataricus P2
[NCBI] 		273057 Archaea > Crenarchaeota > Thermoprotei > Sulfolobales > Sulfolobaceae > Sulfolobus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009008081.1 [NCBI]
Genbank nucleotide accession
NC_023585 [NCBI]
CDS location
range 19107 -> 21380
strand -
CDS
ATGATGAGAGTTACTAGAAAGACCATATTTCTAATCGTGTTATTTTTAGTTTTCTTTATCTTACCGTTTTTCTTGCTAACAACAAAAGCTAGTCTTATCCAAGAAGAAGTCCCTATATCAGTTAATGTAAACACAAACATTTCGCAAGGGCTAATTTACATTGCTCCACTCCCACAACAAACCCAAGTGTTCGGTCAAAATTATTACGTATCAAACTCCTTGGGTTATTATGAATATTCATATTTGTTCTCAGCAACACCACCGTTGCTGGTATGGTACGAGCCAGCTCCTTCATCACAAACTTATTATTTCGTTTACGGGGGAAATACTCAAGCTAGTGCCGTAACCACTGGTGTGTTCAGTTTTTACACTCAGTTCTATTATCTCAACACATCTATCTTTAATGTATCAGACGTTTCGTTACTTGGAGGGTCATTGGTACTAAACGGGCAAAATAGCCTTGTAACTTTTACAACGACTGCGTTGCGTTATACATCTGCAGTTATACTTTACACCTTACAATCTTCAGCTCTTGTAACGCCACATGAATTGATATATTCTGGCTCAATTCCTTCAGGTAGCATAGTTACGCTAAGCCTTTTCTCATTTTCCAACTTACAGACAATTCCTTCGTATATAGCGTTTCCTTTCGGGTCTACAACATGGGTTATGGCTTCCGACGGTTATGTCAAAAGCTCACAATTCACAATTTCAAATTCACAATTTACATATAACGCCCAGGTGGCAGGCATGCCGAACGAAGAAGTTGCCCAAGTCGCTTTGCCACAATCATCTGCTATGTACGGATTGGTGTTTCGGTCGTCAGTGTCTTTACAGTACCCTTCTGCTGAATATTTAGCACCGCAAACTGTAGCCCCGCCATCCATTACGTTTAACGGTACTTTTGCGGTATCTCAAAGTGGATCATACGGTTATAACTCCGTACTGTTAGAAAACCCAGTATACTTCTTTGACCCAACGTTACTTAACGGTTCCAATATCCTAGTGTATAACAATAGCAAATGGTACTCTTTACCAGTGCAAGTCAGCAATCTGAAACTTGACCTAAACCATATAGGCATGTATATTTTACCTTATAACTCGTCTTCCAATTACATTTTCTTCGAAGATATACCAGTAGGTAGTGTAATTTCAGTCAGGTATGCAAACGGCACCATATATTCTTTTACCGCGAGCGGAAATACAGTAAACACAGTAGGAGGCGTGAGTTTAGTTAATCTGAAAATTTATGGACGGAATGTGATAGGGATATCAATCCAGCCATCGTTAACAAATACACAAGTCAATTACAACATGCTCGTTGGGTTTTCTGACTTTTTGCACAAAGGAGGGCTGATAATAAATACAACAGGCGTATATGTATATAACTCTCAAACAGTTGTTACAAAGCTGGTAAATAATCCGCGATTCCCGGCTGACGTTGGGGTTGGCTATGCAGACATAGGCAATACATTCTATCTCATAGGTTTCTATTACTACCCAGGGTCTTTTTACACGTTCATAACGCCTATGTCAAACCCGGTCGCGTCAACTGGTATAGTTCCTTATATTAATTATAATGGCACAATACCGCTATCTGTATCAAGTATCGGTATAACACTGTCTTCCGGTCTGTATTATGAAACTACAAGTATCGTAACAGTTGCAACAGGTTTGCCTGCACCATTACAGTCTTCCGTGATCAGTTTGACGACAGCTCCGGGAGACGCACTAGTCAATAACAATAATGCGATCTACCAAACTAAGCTAACAAATTCGTCGTCGTCTCTAACACTAATAGGCTTCGCTGGGTATAACCTTGTTATACAATATGGGAGTATACAATCACAACTTATCATATCAAATAACTATTACCCAACAAATTTGCCGACAAACTTACAGGTAGTTGTTACAGTATCTGAATCTTCTAGGACGATAACAATTTCCACATCACCACTTCCAGTGAAACCAGTCCAGGTCGCATCATTGAATGTTACTAATACAACCACTGTAACGTATAACGGTAGTAGCGGATCTTCATTTATAACTAATATACATACAACAAATAATCAACTAATAGGAATTATAACATACTATAGTTTTCTAGCAATAGCTGTAGCATCTTATCGTTATTCTTCTCAACTGTGGTCTTCAACATTGTTTCTTAGTTTCGCTACACTCTCTATAGGTCTGCTCTTTGCTGACTATACAATACTACCCTTCAGTATCGGTGCCGTAATATTAGGCTTCATATTTAAGAGGCTAAACCTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f936bfeca4b35e5b00612a54aee2f42c30560bb1365d4405f2a87b8753949e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4409
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Intracellular viral conflicts exploiting CRISPR immune systems in Sulfolobus Erdmann,S., Le Moine Bauer,S., She,Q. and Garrett,R.A. 2014-01-17 — GenBank