Protein

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Genbank accession
AUR84253.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKINRFNGDLRAFAEDALANERTTFGSTTTQSDELSDQITPEFLRGWGFVASNEFPTLQDFSAAMYTATKLLAYLHQMGVAEWNAGQEYPTEGALVVHNGRNWKRAATWVLGDEPSVSSSWSAIGGATGGGGDAVFYENDTNVTTDYTITTGQNAMSAGAITIDSGATVTVPTGSTWTVV
Physico‐chemical
properties
protein length:181 AA
molecular weight: 19308,89600 Da
isoelectric point:4,35002
aromaticity:0,10497
hydropathy:-0,23978

Domains

Domains [InterPro]
DC_1875
STR
2–181
DC_1875
G3DSA:2.10.10.20
ATT
62–129
G3DSA:2.10.10.20
IPR003610
CBM
81–125
IPR003610
cd12215
STR
82–121
cd12215
AUR84253.1
1 181
Architecture
STR
ATT
STR
STR 2-61 | ATT 62-129 | STR 130-181
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.052.A._10N.286.46.C3
[NCBI] 		2070717 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84253.1 [NCBI]
Genbank nucleotide accession
MG592433.1 [NCBI]
CDS location
range 17813 -> 18358
strand +
CDS
ATGTCTAAAATAAATCGTTTTAACGGGGATTTACGGGCTTTCGCTGAGGACGCGCTAGCTAATGAGCGCACAACCTTTGGGAGCACCACAACACAATCCGACGAGCTGAGCGACCAGATCACGCCTGAGTTTTTGCGCGGATGGGGGTTTGTTGCTTCAAATGAATTCCCAACACTTCAGGACTTTTCCGCCGCAATGTACACGGCAACTAAGTTGCTCGCATATCTTCATCAAATGGGCGTTGCGGAATGGAATGCGGGGCAGGAATACCCGACAGAGGGCGCGCTTGTCGTGCACAATGGGCGAAACTGGAAAAGGGCGGCGACTTGGGTTTTAGGCGATGAGCCTAGCGTGTCTTCTTCATGGTCTGCTATTGGTGGCGCTACTGGTGGAGGCGGTGACGCGGTATTCTATGAAAATGATACAAACGTCACTACAGATTACACTATCACGACGGGACAAAACGCAATGTCAGCGGGCGCTATAACTATCGATAGCGGCGCGACGGTTACAGTTCCTACAGGCTCAACTTGGACGGTGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7ee7d635dab9c63296bba00e033b2b3cc6424338c59e71b49c72fabd1d45cfe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank