Protein

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Genbank accession
AUR84348.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLNKRATYGDDWGVPSAEHPAGECLNRSAPGVEDGSYFEKAWVNDLMALPGAIMNAAGYTPNGTEDTATASQVFDALVNSRWSAIANYTAGTIVTASDGKQYCCKLGNGRGSSVVNPVGDISGSWIQYPEQIIEGPNGIALKRANGVLTIDETVSGITSSTLNSNGKYEVTIPITFAIPYISPPKIQATPDNDFPPLSESTSTNSITVTGFNLIIASENPSTTVYANWSSLGRWS
Physico‐chemical
properties
protein length:235 AA
molecular weight: 24850,24900 Da
isoelectric point:4,51133
aromaticity:0,08511
hydropathy:-0,20851

Domains

Domains [InterPro]
DC_0226
STR
1–233
DC_0226
IPR037221
RBD
154–223
IPR037221
AUR84348.1
1 235
Architecture
STR
STR 1-233 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.054.O._10N.261.52.A1
[NCBI] 		1881382 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84348.1 [NCBI]
Genbank nucleotide accession
MG592434.1 [NCBI]
CDS location
range 26046 -> 26753
strand +
CDS
ATGCTTAATAAACGTGCAACTTATGGTGATGACTGGGGTGTACCTAGTGCAGAACACCCGGCTGGAGAGTGTTTAAATAGGTCCGCGCCCGGTGTAGAGGATGGTAGTTATTTTGAGAAAGCTTGGGTCAATGACCTAATGGCGCTTCCTGGTGCAATAATGAATGCTGCTGGCTACACACCTAATGGTACAGAAGATACAGCAACTGCATCTCAAGTTTTTGACGCTCTTGTTAATTCAAGATGGTCTGCAATCGCTAACTACACCGCAGGAACCATCGTTACAGCATCGGATGGTAAGCAATATTGTTGTAAGTTAGGAAATGGGAGAGGCTCTTCAGTAGTTAATCCCGTTGGGGATATATCAGGTTCTTGGATTCAGTATCCAGAGCAAATAATTGAAGGACCAAATGGTATTGCATTAAAAAGAGCAAATGGAGTGCTTACAATTGACGAAACAGTATCGGGGATTACATCGTCAACACTAAATTCAAACGGTAAGTATGAAGTAACAATACCTATTACATTTGCTATTCCTTATATTTCACCGCCTAAAATACAAGCAACGCCAGACAATGACTTTCCTCCCCTTTCTGAGTCTACTTCAACAAACAGCATAACAGTTACAGGATTCAATTTGATAATTGCATCTGAAAACCCAAGCACAACAGTTTATGCAAATTGGTCTTCTTTGGGGAGATGGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bce2429a411133252d531367caed303e90a4e327b854998b6bf53c2bdfd74eb5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank