Protein

View in Explore
Genbank accession
QIG72945.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,76
Protein sequence
MLLGLSLALTNPRLNSGGGATPAFSFDPVTSMFADDCAMGPWYALSTTPPIIKTSDGKVWASYQGFDWVNGAGLENKVKVYSGGAWGTENAALICDSSTDNHGGPALLETTGGYIQMFGGTHNGPMRHAVTTTPGNPATFVRQADIGNLYTYPHPTMAADGNIHLFVRKAINAETRMPLMLVKSTAMASGVPTWGAEKELINFETDSRYYQGGMVEIGTEVHMLATKADFADTVRRNVYYVIYDKADGTIYNHNKSVSVAAASQPINLSTMNTSFRIVDQEGAGTFGQVPCLAITSNGDKHIAYLDGSGATRSVKVISIVSGVIGSPVTIDTVANNQSSVCLRKMDDGARLELAWAKENAFTYPGGGGDIWRAERSSGGVWSTPAKIAAATKMYAYSSITPVYNGSDDMAFAFGEVIGTSTTDVENGYVCRAYMYGSSGYVPRSATYDTDAATYFAAMTTQETTAKKNTIDAFIKVMRALNKWSTFEAIHFGALATQQAALIDMTGRHTFSASGSPSFVANEGFDPDGVDDYIDLGFNPATTGSLRIAQTALSIMAFVIDEGQETNALMGTLATASPTVSLVPRNTSDTATTRLNDGTSLNGTNALAYGFFLARRTGSTKELYKNRTRLSTASTAATGTVNGQAILFGSGTGRSNKRAPFAAWATQSFSQLSTPAVCNAIVRLLLESGVISADIPD
Physico‐chemical
properties
protein length:696 AA
molecular weight: 73782,86510 Da
isoelectric point:5,65749
aromaticity:0,09195
hydropathy:-0,10302

Domains

Domains [InterPro]
DC_0727
STR
23–696
DC_0727
PF15892
STR
86–306
PF15892
QIG72945.1
1 696
Architecture
STR
STR 23-696
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG72945.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4610
Central domain 11 209 200 0,2620
C-terminal 210 696 486 0,8196
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N3_2
[NCBI] 		2509747 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72945.1 [NCBI]
Genbank nucleotide accession
MN988526 [NCBI]
CDS location
range 18932 -> 21022
strand +
CDS
ATGCTGCTTGGTTTGAGCCTCGCGCTAACGAACCCGCGTCTAAATTCAGGAGGTGGTGCAACCCCTGCGTTCTCATTCGACCCGGTAACCTCGATGTTTGCCGATGACTGTGCCATGGGGCCTTGGTATGCATTGTCAACGACTCCTCCGATCATAAAAACTTCTGATGGTAAAGTCTGGGCGTCGTATCAGGGTTTTGATTGGGTCAACGGCGCCGGCCTCGAAAACAAGGTCAAGGTCTATTCCGGCGGCGCATGGGGAACCGAGAACGCAGCGCTGATCTGCGACAGTTCTACCGACAACCACGGCGGCCCCGCTCTGCTGGAGACGACCGGCGGCTATATCCAGATGTTCGGCGGCACTCACAATGGCCCGATGCGCCATGCCGTGACCACGACGCCAGGCAATCCGGCGACGTTCGTTCGCCAGGCGGATATCGGCAATCTCTACACCTACCCGCACCCGACGATGGCGGCAGACGGGAACATCCATCTCTTCGTGCGCAAGGCGATAAACGCCGAAACTCGCATGCCGCTCATGCTTGTCAAGAGCACGGCGATGGCGTCTGGTGTCCCGACCTGGGGCGCTGAGAAGGAACTGATCAACTTCGAGACGGACAGCCGCTACTACCAGGGCGGGATGGTCGAAATCGGCACCGAAGTCCACATGCTGGCAACCAAGGCTGACTTTGCTGACACGGTGCGCCGCAACGTCTACTATGTCATTTACGACAAGGCGGACGGCACGATCTACAACCACAACAAGTCGGTATCCGTAGCCGCTGCGAGCCAGCCCATAAACCTCTCAACGATGAACACCAGCTTCCGCATCGTGGATCAGGAGGGCGCCGGCACATTCGGCCAGGTGCCTTGCCTCGCCATCACCTCCAACGGCGACAAACATATTGCCTATCTCGACGGTTCCGGCGCCACGCGATCCGTCAAGGTGATTTCGATCGTCAGCGGCGTCATCGGCTCTCCTGTCACGATCGACACGGTCGCAAACAACCAGTCTTCCGTATGCCTCCGCAAGATGGACGACGGCGCGCGGCTGGAACTCGCTTGGGCAAAAGAGAACGCCTTCACCTATCCCGGCGGCGGCGGGGATATCTGGCGCGCCGAACGCTCCTCTGGTGGTGTCTGGAGCACGCCGGCCAAGATTGCGGCCGCAACCAAGATGTACGCCTATTCCAGCATCACGCCGGTCTACAACGGCTCCGACGATATGGCCTTTGCCTTTGGCGAGGTCATCGGCACCAGCACCACCGACGTTGAAAACGGCTATGTCTGCAGGGCCTACATGTACGGCTCTTCCGGCTATGTGCCGCGGTCGGCAACCTATGACACGGATGCAGCGACGTACTTCGCCGCGATGACGACACAGGAGACGACGGCGAAAAAGAACACCATTGACGCCTTCATCAAGGTCATGCGCGCGCTGAACAAGTGGAGCACGTTCGAGGCAATCCACTTCGGGGCTCTTGCAACACAGCAGGCGGCATTGATCGACATGACCGGCCGCCATACCTTCAGCGCCAGCGGTAGCCCGTCCTTCGTGGCGAATGAGGGCTTTGATCCCGATGGCGTTGACGACTATATCGATCTCGGTTTCAACCCGGCGACCACCGGCAGCTTGCGGATCGCGCAGACGGCCCTTTCCATCATGGCGTTTGTCATCGATGAGGGGCAGGAGACCAATGCTCTTATGGGCACGCTCGCCACGGCAAGCCCGACCGTGAGCCTTGTTCCCCGCAATACGAGCGATACGGCAACCACCCGCCTCAATGACGGCACCAGCCTCAACGGCACCAACGCGCTCGCCTACGGCTTCTTCCTGGCCCGCAGAACCGGCAGCACGAAGGAACTGTACAAGAACCGCACGCGCCTCAGCACGGCATCCACGGCGGCTACAGGTACTGTCAACGGTCAAGCGATCCTGTTCGGCTCTGGAACTGGCAGATCAAACAAGCGCGCTCCATTCGCCGCTTGGGCCACGCAATCCTTCAGCCAGCTTTCTACGCCGGCCGTCTGCAACGCCATCGTGCGTCTTCTGCTCGAAAGCGGCGTTATCTCCGCAGACATTCCGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
99616b6afc2e9fed0e9d97ee07da87605263378dd4018e1ac4b5d005096490ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8029
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank