Protein

View in Explore
Genbank accession
URN70752.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIDYNGLKTIFGEKLPESHIFFATVAAHKHVPSYAFLRRELGLSSAHTNRKVWKKFVEAYGKAVPPAPPLTLSKDLTASMSVEEGAALTLSVTAAGGTGPYTYAWTKDGSPIPDASGATYTKPTAAAEDAGSYKVTVTDSKQVSKDSTACAVTVNPTVPGG
Physico‐chemical
properties
protein length:161 AA
molecular weight: 16879,87730 Da
isoelectric point:8,59243
aromaticity:0,08696
hydropathy:-0,17764

Domains

Domains [InterPro]
IPR048804
ATT
2–60
IPR048804 IPR007110
DC_0400
STR
2–159
DC_0400
IPR013783
STR
76–154
IPR013783
IPR036179
RBD
76–151
IPR036179
PF13927
STR
79–138
PF13927
URN70752.1
1 161
Architecture
ATT
STR
ATT 2-60 | STR 61-159 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC104
[NCBI] 		2936939 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URN70752.1 [NCBI]
Genbank nucleotide accession
ON185581.1 [NCBI]
CDS location
range 100735 -> 101220
strand -
CDS
ATGATTGATTATAATGGTCTAAAGACCATTTTTGGTGAAAAACTACCAGAATCTCATATCTTCTTTGCTACGGTTGCTGCGCATAAACATGTTCCTAGCTATGCTTTTCTACGTAGAGAACTAGGACTTTCATCTGCGCATACTAACCGTAAAGTATGGAAGAAATTTGTAGAGGCTTATGGTAAAGCAGTTCCTCCTGCTCCACCATTAACTCTTTCTAAAGATTTAACTGCTAGCATGTCCGTTGAAGAGGGAGCAGCATTAACACTTTCTGTTACTGCAGCTGGTGGTACTGGTCCATATACTTATGCATGGACTAAAGATGGTTCTCCGATTCCGGATGCTTCAGGAGCTACCTATACTAAGCCTACAGCAGCAGCTGAGGATGCCGGCTCTTATAAAGTAACTGTAACAGATAGTAAGCAAGTAAGTAAGGATTCTACTGCATGTGCTGTAACAGTTAATCCTACTGTTCCTGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8cf6be9c46324ca206e5364dfbe176cbdf9cd01381123e942cea01312a68c944
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7408
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank