Protein

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UniProt accession
A0A8S5R1J3 [UniProt]
Protein name
Head closure knob
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MLNLKYFENTLDNNVFGCDPNEQYRDLEQEYIDDNWENTSIRYTIEEQDGYGELNFHKIEAWVNNVIATSSSGSRSGQDYLQFFFRNINHSLSQGLYYRFNDNYWLAYFYSKFQGIPGDTLVRRCNNALRIVDPVDGSIFEIPCVVEYDMGSPATQISMYVLTPNNHASVMVQSNSDTRRLFVTNTRYILGGRPFKLNGYQNALLYKEGIEDSQILYLDLYLDEKHARDDFERQVAYNGEYNYELRIAEDNIEVATSGSGQLHANVTLNGDDVKREIKWRSSDDSVVTVDETGRYWAKKLGSAVISAIFGDLETTITIKVVEVNTEPYIELKTCPTKIREYDTAYFVVQVLVDGKEVSAEISATLDNGTTKDKNLELKFTKNTVMATCIKRDGQLHNINIKAHLQDGRDIIKIVSVRLVSMMG
Physico‐chemical
properties
protein length:423 AA
molecular weight: 48421,59610 Da
isoelectric point:4,90233
aromaticity:0,10875
hydropathy:-0,43830

Domains

Domains [InterPro]
DC_1138
STR
2–245
DC_1138 IPR003343
DC_2289
STR
210–418
DC_2289
G3DSA:2.60.40.1080
STR
243–323
G3DSA:2.60.40.1080
IPR008964
RBD
249–320
IPR008964
A0A8S5R1J3
1 423
Architecture
STR
STR 2-418 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5R1J3
1 423
Domain Start End Length (AA) Confidence
N-terminal 1 366 366 0,6909
Central domain 367 412 47 0,2644
C-terminal 413 423 10 0,9445
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-366
Central
367-412
C-terminal
413-423

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ct6d71
[NCBI] 		2826298 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE25342.1 [NCBI]
Genbank nucleotide accession
BK015797 [NCBI]
CDS location
range 29237 -> 30508
strand +
CDS
GTGCTTAATCTCAAGTATTTTGAAAATACATTGGATAATAACGTATTTGGTTGCGACCCCAATGAGCAGTACCGCGATTTAGAACAAGAATATATAGATGATAACTGGGAAAACACAAGTATTCGCTACACTATTGAAGAGCAAGATGGTTATGGAGAATTAAATTTCCATAAGATAGAGGCATGGGTCAATAATGTAATTGCGACATCTTCTTCTGGCTCTCGCTCTGGCCAGGATTATCTTCAATTCTTCTTTAGGAACATCAACCATAGTTTGTCGCAAGGATTATATTATCGTTTTAATGATAATTATTGGTTAGCTTATTTTTATAGTAAGTTTCAAGGTATTCCTGGTGACACTTTGGTAAGACGATGTAACAATGCTTTAAGAATTGTAGACCCAGTGGATGGTAGCATATTTGAAATTCCATGTGTGGTAGAATATGATATGGGTTCACCAGCTACTCAAATTTCTATGTATGTGTTGACACCAAACAACCATGCATCTGTTATGGTTCAATCTAATAGCGACACAAGGCGCTTATTTGTCACTAATACTAGATATATTCTTGGTGGCAGACCATTTAAATTAAATGGCTATCAAAATGCTTTGCTTTATAAGGAAGGTATAGAAGATTCTCAAATTTTATATTTGGATTTATATCTTGATGAAAAACATGCCAGAGATGACTTTGAACGGCAAGTAGCCTATAATGGCGAATATAATTATGAACTCAGAATCGCAGAAGATAACATTGAAGTGGCGACTTCTGGTTCAGGACAACTTCATGCTAATGTTACATTGAATGGTGATGATGTTAAGCGTGAAATAAAGTGGCGCTCTTCTGATGATAGTGTTGTGACTGTTGATGAGACTGGTAGATACTGGGCGAAAAAACTTGGCTCTGCTGTTATTTCTGCTATTTTTGGAGATTTGGAAACAACTATTACTATTAAAGTAGTAGAAGTCAATACTGAACCTTATATTGAGTTAAAGACATGTCCTACTAAAATTAGAGAGTACGACACTGCATACTTTGTTGTCCAAGTTCTTGTGGATGGCAAGGAAGTTTCTGCTGAGATTTCTGCAACTTTGGACAACGGAACAACTAAGGATAAAAATTTGGAACTGAAATTTACAAAAAATACTGTTATGGCAACATGTATTAAACGTGATGGACAGTTACATAATATAAATATCAAAGCTCATTTACAAGACGGGCGAGATATTATTAAAATAGTAAGTGTGCGACTTGTATCAATGATGGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6daa2d7b176302b0f186a059e8ebc1189b1d5116cfbc64200ae05b08bcfe5fb0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8605
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50