Protein

View in Explore
Genbank accession
XCO38560.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERVVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGENGTDAINKNQLDTTLGEAGGILSQVKEVQEDIQDYIQKFGDDSAMVRGVNWVYNGGSAIGGETSFIIDKEAPVFAVPYIEVNGSRQFRDWQYEYDPATKRVTLVKPLEAGDFVVCLTTENKLPLEDLLASTGGAASIGKAGGGTVQDGLDATIHGTDVHRDTVTPGKLDTLLVYNGTNAGRDLRGHEFVMPHGTFSATRILRTRGIPAAEPKYTSFTWRGQGSSFTKLVHPSTGGQGDIAFMDYLKDVTMSGFMMDNTALGQGTSKQDTRNGQFWIRHSVDSYFDDLRFAGADALTFCLDHCKNIYSTNLKVDYQLRYPVGTGKSPLIVGDYSEQCMFIGGYVKTVSPDGTIKYAGDLADNDQADDTKWAFINLYGLTFEQKPNSNACMWQEGEGAPSNAHFIGMNYINNGVGHGVSEKAVGTDIGSTFRQAQVRAVWNRAEYISIGGHFIDNDAKYPAGTGGAGTAAAGGVHNDNAKFTSLVGDYFRGNFADYTDYTGASGVNPENSTHITNAKLTSTIRTASSSTSQHLAIVNCQLASAGRIGGGGNGRLHVSVVASHCVGPLGQFGHGQSETYLDVINSTFTAAGSTEAMITQSGVGNISFANSTFRDYVRVVDGSQTRVTFRNCTFYTCTFTEDDRKARYVNCRFISCTDAPDSFGLNFAADSLDRPSSLRVNVTLTAGGSYTFPAWVLQGRGAYFINVGGNGVNLPACAGIIGKGSATGSGVWTPQWESTAGSIVVSWPSNGYITVTATTAGNYTIGVH
Physico‐chemical
properties
protein length:903 AA
molecular weight: 97353,96850 Da
isoelectric point:5,51699
aromaticity:0,09635
hydropathy:-0,27741

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604
DC_0778
STR
1–529
DC_0778
XCO38560.1
1 903
Architecture
ATT
STR
ATT 1-127 | STR 128-529 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38560.1
1 903
Domain Start End Length (AA) Confidence
N-terminal 1 298 298 0,9913
Central domain 299 807 510 0,9903
C-terminal 808 903 95 0,9677
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-298
Central
299-807
C-terminal
808-903

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146019
[NCBI] 		3232199 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38560.1 [NCBI]
Genbank nucleotide accession
PP889469.1 [NCBI]
CDS location
range 35358 -> 38069
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTATCCTACAGGGTCCACTGAGTTTGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGCGTATCGCTGGTGTCTGACGACAACCGCAGACTGCTGAGTAACATCACCGAGTACCGATACGTGTCTAAGACCAGAGTTAAACTGCTGGTAGCAACCACTGGTTTCGACCGTGTAGAGATTCGACGGTTCACATCGGCGTCAGAGCGAGTGGTGGACTTCAGCGACGGTTCTGTATTGCGTGCCAACGACCTCAATGTCTCGCAGCTCCAGTCTGCACATATTGCTGAAGAAGCCCGTGATGCCGCACTTCTGGCAATGCCGGAGGATGACGCTGGTAACCTCGACGCCCGCAACCGTAAGATTGTGCGACTGGCTCCCGGTGAGAACGGTACCGACGCTATCAACAAGAACCAACTGGACACCACCTTAGGTGAGGCCGGAGGTATCCTGTCTCAGGTCAAAGAGGTGCAGGAGGACATTCAGGACTACATTCAGAAGTTCGGCGATGACTCCGCTATGGTTCGTGGAGTAAACTGGGTGTATAACGGTGGGTCTGCCATTGGCGGAGAGACCTCCTTTATCATCGACAAGGAAGCACCAGTGTTCGCTGTGCCGTACATCGAGGTAAACGGAAGTCGTCAGTTCCGAGATTGGCAGTATGAGTATGACCCTGCAACCAAGCGGGTAACTCTGGTTAAACCTCTGGAGGCTGGAGACTTCGTTGTGTGCCTAACCACCGAGAATAAGTTACCTCTGGAAGACCTTCTGGCCAGCACTGGCGGTGCCGCTTCAATTGGTAAGGCTGGTGGCGGTACGGTTCAGGACGGTCTGGATGCAACGATACACGGTACCGATGTCCACCGTGACACTGTGACTCCCGGTAAACTAGACACACTCCTTGTGTACAACGGGACTAACGCTGGGCGAGACCTCCGTGGTCATGAGTTCGTAATGCCACACGGTACATTCTCCGCGACTCGCATCCTGAGGACCCGTGGCATCCCAGCTGCTGAGCCTAAGTACACGTCGTTCACTTGGCGTGGTCAGGGCAGTTCGTTCACCAAGTTGGTCCACCCATCGACTGGTGGTCAGGGCGACATTGCGTTCATGGACTACCTGAAGGATGTCACGATGTCTGGTTTCATGATGGACAACACCGCGCTAGGTCAGGGGACTTCCAAGCAGGATACCCGTAACGGCCAGTTCTGGATTCGACATTCGGTTGACTCCTACTTCGACGACCTGCGATTCGCTGGTGCTGATGCCCTTACGTTCTGTCTGGACCACTGTAAGAACATCTACTCGACAAACCTCAAGGTAGACTATCAGCTGCGCTATCCGGTTGGCACAGGTAAGTCCCCGCTCATCGTGGGCGACTACTCGGAGCAGTGCATGTTCATCGGCGGCTACGTCAAGACCGTGTCACCTGACGGTACCATAAAGTACGCTGGGGACCTCGCAGATAACGACCAAGCGGATGATACCAAATGGGCGTTCATTAACCTGTATGGATTGACGTTCGAGCAGAAGCCAAACTCTAACGCCTGTATGTGGCAAGAGGGTGAAGGTGCTCCATCCAACGCCCACTTCATCGGTATGAACTACATCAACAACGGTGTGGGCCATGGTGTGTCTGAGAAAGCTGTGGGTACTGACATTGGGTCTACCTTCCGTCAGGCTCAGGTTCGTGCTGTATGGAACCGTGCTGAGTACATCTCAATCGGTGGCCACTTCATTGACAACGACGCTAAGTATCCTGCCGGTACTGGTGGGGCTGGTACTGCGGCTGCTGGTGGTGTCCATAACGACAACGCCAAGTTCACATCTCTGGTTGGTGACTACTTCCGTGGTAACTTCGCGGATTATACCGACTACACAGGGGCATCTGGCGTTAACCCAGAGAACTCAACCCACATCACCAACGCAAAGTTGACATCCACCATTCGCACAGCGTCCTCCAGTACCTCTCAGCACTTAGCCATCGTGAACTGCCAGTTAGCCTCTGCGGGTCGTATTGGTGGTGGCGGTAACGGGAGACTCCACGTTTCCGTTGTGGCATCTCACTGCGTTGGGCCTCTGGGCCAGTTCGGCCACGGACAGTCCGAGACGTACCTTGACGTCATCAACTCTACGTTCACTGCCGCTGGTAGTACTGAGGCGATGATTACCCAGTCAGGTGTTGGTAACATCTCGTTCGCTAACTCAACGTTCCGTGATTATGTCCGTGTGGTAGATGGTTCACAGACCAGAGTTACTTTCCGTAACTGTACGTTCTACACCTGTACTTTCACCGAGGACGACCGTAAGGCTCGCTACGTTAACTGCCGATTCATTTCGTGCACTGACGCGCCAGACTCCTTCGGCCTCAACTTTGCGGCAGACTCTCTGGACCGTCCGAGCTCACTGCGAGTTAACGTAACGTTGACTGCGGGTGGTAGCTACACGTTCCCGGCGTGGGTACTTCAAGGTCGTGGTGCATACTTCATCAATGTCGGTGGCAATGGTGTCAACCTTCCTGCCTGCGCTGGCATCATCGGTAAGGGTAGCGCGACTGGTAGTGGCGTATGGACCCCTCAGTGGGAAAGCACTGCGGGTAGCATTGTTGTATCTTGGCCGTCCAATGGCTACATCACCGTTACGGCAACAACAGCTGGCAACTACACAATCGGCGTTCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfbec0e914e27ab953ca50586c06d8cc41c7ae330332332265d1588d1e2db0b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank