Protein

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Genbank accession
UXR08120.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MVNSMFGGDLDPYEKSLNYEYPYHPSGNPKHIDISEIDNLTLADYGWSPGAVKAYMFGIVVQNPDTGQPMGDEFYNHILERAVGKAERALDISILPDIQQEMRDYHETEFNSYMFVHAYRKPILQVENLQLQFNGRPIYKYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFNGYPQLAGVYPPSGATFAPQMIQLEYVSGMLPRKKAGRNKPWEMPPELEQLVIKYALKEIYQVWGNLIIGAGIANKTLEVDGITETIGTTQSAMYGGASAQIIQIDSDIKELLEGLRAYFGYNMIGL
Physico‐chemical
properties
protein length:302 AA
molecular weight: 34064,38690 Da
isoelectric point:5,01396
aromaticity:0,11921
hydropathy:-0,28874

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_ScaM-V1SC04
[NCBI] 		2983349 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus capitis
[NCBI] 		29388 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXR08120.1 [NCBI]
Genbank nucleotide accession
OP297178.1 [NCBI]
CDS location
range 5425 -> 6333
strand -
CDS
ATGGTTAACTCAATGTTTGGAGGGGACTTAGACCCTTATGAAAAATCATTAAACTATGAATATCCTTATCATCCTAGCGGTAATCCTAAACATATAGATATAAGTGAGATAGATAACTTAACATTAGCTGACTACGGGTGGTCACCTGGTGCAGTTAAAGCTTATATGTTCGGTATTGTAGTACAAAACCCTGATACAGGACAGCCTATGGGTGACGAGTTTTATAATCATATATTAGAAAGAGCAGTAGGTAAAGCTGAGAGAGCGTTAGATATATCTATACTACCTGACATTCAACAAGAGATGAGAGATTATCATGAGACAGAGTTTAATAGTTATATGTTTGTACATGCTTACAGAAAACCTATATTACAAGTAGAGAACTTACAGCTACAATTTAATGGTAGACCTATATATAAATACCCTGCTAACTGGTGGAAAGTAGAGCATTTAGCAGGTCATGTTCAATTGTTTCCTACAGCACTTATGCAAACAGGACAATCAATGTCATATGATGCTGTATTCAATGGTTACCCGCAGTTAGCAGGAGTATATCCACCAAGTGGAGCAACATTTGCACCTCAAATGATACAACTAGAATATGTATCAGGTATGCTTCCACGTAAAAAAGCAGGAAGAAATAAACCTTGGGAGATGCCTCCTGAGTTAGAACAGTTAGTTATAAAATATGCATTGAAAGAAATATACCAAGTATGGGGTAACTTAATCATCGGTGCCGGTATTGCTAATAAAACATTAGAAGTAGACGGTATCACAGAAACAATAGGAACTACTCAATCAGCTATGTATGGTGGAGCTAGTGCTCAGATAATTCAAATTGATTCTGATATAAAAGAACTATTGGAAGGTTTAAGAGCTTACTTTGGATATAATATGATAGGATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
26a5a822b686d4d93e55936a0008e0b0635b4356a8dc07e2c9e8e5685f21bf64
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7290
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
An innovative bacteriophage-based decontamination to control environmental colonization of intensive care units with Staphylococcus capitis : an in vitro proof-of-concept Chavignon,M. and Kolenda,C. 2022-11-16 — GenBank