Protein

View in Explore
Genbank accession
XYA29286.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKTQFNQSQGSTSRETNKEAIARIFGLKKSQVGYLSTSTPIDSYVILFDKESQTCWYRDTATGTPINWTKVEQKMHLITDAGDFYLGIADIKLNLANNSGVSYIGGLGFLCPEMFSNNAPYTSDYAPYIKAAIQAASDGPIKKVLIGREYISSTVNYSIPDNVSIIGAGSGTGFIFATPPTATMHEFFTIAGKGVLLKDFSIKFNTGGLGSIGAVQAYGVWFKDTSTNCVADGLIIDGKYSDSTMGFSNGFRLTGTDNVIKNCIVTHCSMGATVRGTRLSVLDSTFDNGYTTEDGTAWNSSKPQWDGIACEGIIDCLISRNICKNNGQSGIYIGGGGAGYSSGNIISDNRVYHNWNRGIDTGISGSQSTSNDVTNLIISNNYIRNNRETQLWLYGTNNTQVLSNKIIETAEYDTLFGSQPSTSRAGLALGQAAWCVNNIIDDNDIQVRTTTPFGVVFNGLGHIISQNNRIGGGASNYWFGSPVNMVYSNKVAYFKANFSPVLRAGSSGVTLTTGSASYTIRNNEVEYDIELLMNASTGSGNLYVGTLPATNGVLLDSQEVIVTYWTGLTWALIPGSQLQAYFLIDDPAQIAIVRKYGSDTLNDVPSCIGVGTRLRIKARAVINTTTKTNSATGISFFGHSFLSEQGFANGVAESLGKRCYNFARGGSSSSETARVFGAVVGNYMPVGGTIPASGSVDLTPNEDAVWYAGSSLATVVLAGVQGIISSTTVSGTTTKLTFTRSTAGAAVSVPSAVPMTVLPYVRQNSWSTKSLTEHSTFKDDIVVIQCMRNNSSWAQGITDVASIVSSLGTNKFVILPEFPYATETTGTAGATTVSTYNAQLKAAYPNNYCQINGVDLLDNFKNNHNPNYPQDVTDVANGVTPSSLRYDNLHPSRYRQDNALRSGVQVNAEFVARFIKSKGW
Physico‐chemical
properties
protein length:920 AA
molecular weight: 98629,06500 Da
isoelectric point:6,53025
aromaticity:0,09783
hydropathy:-0,13152

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–92
G3DSA:3.30.2020.50 IPR012334
IPR012334
STR
122–455
IPR012334
IPR011050
STR
124–406
IPR011050 DC_1569
IPR006626
Unmapped
192–224
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
216–366
IPR039448
XYA29286.1
1 920
Architecture
ATT
STR
ATT 1-92 | STR 110-920
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29286.1
1 920
Domain Start End Length (AA) Confidence
N-terminal 1 122 122 0,9831
Central domain 123 489 368 0,9929
C-terminal 490 920 430 0,7090
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-122
Central
123-489
C-terminal
490-920

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM-Bestiario
[NCBI] 		3447922 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29286.1 [NCBI]
Genbank nucleotide accession
PV891801.1 [NCBI]
CDS location
range 118162 -> 120924
strand +
CDS
ATGAAAACGCAGTTTAACCAATCACAAGGCTCGACTTCACGTGAGACGAACAAAGAAGCGATTGCTCGTATCTTCGGTTTGAAGAAATCCCAAGTCGGCTATTTGTCGACATCCACTCCAATTGATTCTTATGTCATATTGTTTGACAAAGAAAGTCAGACTTGTTGGTATCGTGATACGGCAACAGGTACACCGATAAATTGGACAAAGGTAGAACAGAAAATGCATCTAATCACAGATGCAGGGGATTTCTATCTGGGTATAGCAGACATAAAATTAAATTTGGCAAACAATAGTGGAGTAAGTTATATTGGTGGTTTAGGGTTTTTATGCCCTGAAATGTTTTCTAATAATGCCCCATATACTAGTGACTATGCCCCATATATCAAAGCAGCTATTCAAGCAGCTAGTGATGGCCCCATTAAGAAAGTTTTAATTGGTCGTGAGTACATCTCGTCTACTGTTAACTACAGCATACCGGATAACGTAAGCATCATTGGTGCTGGTTCTGGGACGGGTTTCATATTTGCTACTCCCCCTACTGCAACTATGCATGAGTTCTTCACTATTGCGGGTAAGGGGGTGTTACTTAAAGATTTTTCTATCAAGTTTAATACTGGTGGCTTGGGTTCAATTGGAGCGGTTCAAGCTTATGGGGTCTGGTTCAAAGACACCTCGACAAATTGCGTTGCTGATGGACTAATCATCGACGGTAAATACTCAGATTCCACAATGGGTTTCAGTAATGGTTTTCGTCTGACGGGGACCGATAATGTAATTAAAAATTGCATAGTTACTCATTGTTCAATGGGTGCAACTGTTCGCGGTACACGCCTTAGTGTCTTAGACAGCACTTTTGACAATGGATACACAACTGAGGATGGTACTGCCTGGAATTCCAGTAAACCACAATGGGACGGGATAGCCTGTGAGGGCATCATCGATTGTCTTATTTCCAGAAACATTTGTAAGAATAATGGGCAGTCTGGCATCTACATTGGTGGCGGTGGCGCAGGTTATAGTTCTGGAAACATTATTTCTGATAACCGCGTATACCATAACTGGAACCGTGGTATCGATACGGGTATATCAGGATCTCAGTCTACGTCGAATGATGTGACTAATCTGATTATCTCCAATAACTACATCCGAAATAACCGTGAAACTCAATTGTGGTTGTACGGGACTAACAATACTCAGGTATTGAGTAATAAGATTATTGAGACAGCTGAGTATGATACTTTGTTTGGGTCTCAACCTTCTACTTCTCGTGCAGGATTAGCTCTGGGTCAGGCTGCTTGGTGTGTTAATAACATCATTGATGATAACGATATCCAGGTACGTACTACTACGCCATTCGGTGTAGTATTTAACGGCTTAGGTCATATTATTTCTCAAAATAACCGTATTGGTGGTGGAGCATCTAACTACTGGTTTGGTTCTCCAGTGAATATGGTTTATTCAAACAAGGTGGCTTATTTTAAAGCAAACTTCTCTCCTGTGCTGCGAGCAGGCTCTAGCGGAGTTACACTAACTACTGGTTCTGCCAGCTATACAATTCGCAATAACGAAGTTGAGTATGATATTGAGTTATTGATGAATGCTTCTACTGGTAGCGGTAATCTGTACGTGGGTACGCTCCCGGCAACTAATGGTGTACTGCTTGATTCTCAGGAAGTTATCGTAACTTATTGGACTGGTTTGACTTGGGCATTGATCCCTGGTAGCCAGCTACAGGCTTACTTCCTGATCGATGATCCTGCTCAGATTGCGATTGTACGTAAATACGGGTCTGATACCCTTAATGATGTTCCATCATGCATTGGTGTTGGTACACGTCTGCGTATAAAAGCTCGTGCAGTCATCAACACGACGACTAAAACTAACTCAGCTACTGGTATATCTTTCTTCGGTCACTCTTTCTTGTCCGAGCAAGGTTTCGCTAATGGTGTAGCTGAATCCTTAGGTAAGCGTTGCTACAACTTCGCGCGTGGTGGGTCTTCCAGTTCTGAAACTGCTAGGGTATTTGGAGCTGTTGTTGGTAATTATATGCCAGTAGGGGGAACCATTCCTGCATCTGGTTCTGTTGATTTAACTCCAAATGAAGATGCCGTTTGGTATGCCGGAAGTAGCCTCGCTACCGTAGTTCTGGCTGGTGTACAGGGTATCATTTCATCTACTACTGTAAGTGGTACAACCACTAAGCTTACGTTTACACGTTCTACGGCAGGTGCTGCTGTATCCGTACCTTCTGCTGTACCCATGACAGTATTGCCTTACGTTCGTCAGAACTCATGGAGTACTAAGAGTCTTACTGAGCACTCTACATTTAAGGATGATATTGTGGTTATTCAATGTATGCGTAATAACTCTAGTTGGGCGCAGGGGATAACTGATGTAGCATCTATAGTTTCTTCGCTGGGAACCAATAAGTTTGTTATATTGCCTGAGTTTCCTTATGCTACAGAGACTACTGGAACAGCTGGTGCAACTACAGTAAGTACTTACAATGCTCAGTTAAAAGCTGCTTACCCTAACAACTACTGTCAGATTAACGGTGTTGATTTACTTGATAATTTCAAGAATAACCATAATCCTAACTACCCTCAGGATGTTACTGATGTAGCTAACGGGGTTACACCGTCTTCACTTCGTTATGATAATCTACACCCTTCTCGTTACAGGCAGGATAACGCATTACGTTCTGGTGTACAGGTTAACGCTGAATTTGTAGCCCGTTTCATTAAAAGCAAAGGTTGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
67da113b9cef10c425f8956e4900a6dae9df7ea72a497e76410a76272c3bdf8b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank