Protein

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Genbank accession
AUR83124.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGELPTVQPTQLGELPTVQLTQLGDGTKVEFDAPSFPKVLPPEAYEVTIDGFQQTPTDSYVTDTVNKVKFNSPVPAGGKVSIQLRNIQEVAPYGDATTSTIIPVGGTEADRKSIPEAIRDSRILPTSATGQPSGSLWNDSGTVTIVP
Physico‐chemical
properties
protein length:147 AA
molecular weight: 15552,20900 Da
isoelectric point:4,41408
aromaticity:0,05442
hydropathy:-0,28844

Domains

Domains [InterPro]
DC_1723
RBD
8–147
DC_1723
AUR83124.1
1 147
Architecture
RBD
RBD 8-147
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.031.O._10N.261.46.F8
[NCBI] 		1881294 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83124.1 [NCBI]
Genbank nucleotide accession
MG592415.1 [NCBI]
CDS location
range 98374 -> 98817
strand -
CDS
ATGGGTGAGTTGCCAACAGTGCAACCTACCCAGCTGGGTGAGTTGCCAACAGTGCAACTCACCCAGCTGGGTGATGGCACTAAGGTAGAGTTCGATGCTCCCTCCTTCCCTAAAGTACTACCACCTGAAGCTTATGAAGTCACCATCGATGGCTTCCAACAGACTCCAACGGATTCGTACGTTACAGATACTGTGAATAAGGTTAAGTTCAATAGCCCTGTACCTGCTGGTGGTAAAGTATCTATCCAGTTAAGAAACATCCAAGAGGTAGCACCCTACGGGGATGCCACTACTTCAACTATCATTCCAGTAGGTGGTACGGAAGCTGATCGTAAGTCCATTCCAGAAGCTATCCGAGATAGTCGAATTCTACCTACCTCAGCTACAGGACAACCTAGTGGCTCCTTGTGGAATGACTCAGGCACTGTAACTATTGTCCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
829176120b01f8bd0e8d09f65e74b29365ef06a8ce89e121d63972c8ddebbee7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank