Protein

View in Explore
Genbank accession
UGL60910.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MTTKVIFTFHNPDGSPQAGKEFSVRLTRPGMNDADDCIVLPESYDMTTDAQGQFTMDLEAATSAYRVSVVDDDSFEDDPCIRTSFTFYVPDSPTPVHVQELILLPPPTSLPWDEAAMNKITQAVVDAREARDEAEGHADRAEEQVDLAKAEVVKAQAEVVKAKDEVTKAQAEVAKAAQQVELAKVEVGKAGASAAAAKVSETNAANSAAGSAASATAATNQANRAKTEADRAESLANQVAEKVEGGNLPALVGMNETFTYEGGEDHYNWTRTGPVNVSQHTGFIRISKTDASGSRSFIRKSVEFPDGHWITYFRVKTQTGTAAQNNSAQIRFLSADGKDYTVYFNINANGLVEPNTIHMQGSEGGARNAATMFTGLNTEAWMDMAVKFDAVNRHIELFRRMPNGTWQKGGGRLMVDTIKPAIIEISSMPVAPNGWWMDVDFITVCRPNLICYGDSIAAGQNEYGVTRGTADYHNNRNWAGTWFGQSSLYATNRNNLVLVQGVEGRRTWQYLDSLGEIENSGVKVVFLHASTNDHKDATMTMAKRTSDTQAIVDRLHAVGAQVVLFNAMQGTKLFNDSLAEGVTKLKAYTDQWWSEELHKVTGLGQVLDIARVVGKDGYFDPAIAADDGLHLTAASAKKIADKLGQFYSNSTSINGLAPLESPAFTGIPTVPTQTPFLPYGKQIANTEYVITFIQDWTSNYGYGDLTMRNKTGAQMAAGGVRSGYYYVPGDSSNPLPGNIYAFVHHMSYDNNKGWELWNQCYSDRMYMRYSNNQGVWQTPVEVVTEKWMDRNSFMTPRVTAFNRLPVASAAGYEGVVPLQAGSSGAWRNLNAGSAGIGLLGAATVENALNYIGGTPKTMTSLRSYSDANAIPNECGFYGVGIAPWANLPPGVTSINPVGSTIYHQVYDASTATQIFIPRTSDICYFRRKAANVWSPWVRYLTDKQLVGTTTNSSTGEPNGAIMESGTTANGWYIRFADGTQMAGARTEPGLPAGANVIRLPASFVSGFNTAVTCNWIPSSNWPTNAGQGVRGAYLNSGSTVSFATAQAAGANDTIMIMAVGRWY
Physico‐chemical
properties
protein length:1063 AA
molecular weight: 115113,14000 Da
isoelectric point:5,43792
aromaticity:0,09501
hydropathy:-0,30762

Domains

Domains [InterPro]
DC_0123
ATT
1–160
DC_0123 IPR051532 DC_0857
DC_1375
STR
115–757
DC_1375 cd19958
Coil
Unmapped
124–186
Coil Coil IPR036514
SSF52266
STR
446–644
SSF52266
cd00229
ENZ
449–646
cd00229
IPR013830
ENZ
451–634
IPR013830
UGL60910.1
1 1063
Architecture
ATT
STR
ATT 1-160 | STR 161-1063
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL60910.1
1 1063
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9923
Central domain 244 495 253 0,5004
C-terminal 496 1063 567 0,7919
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-495
C-terminal
496-1063

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_TUMS_P6
[NCBI] 		2900127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60910.1 [NCBI]
Genbank nucleotide accession
OL519842.1 [NCBI]
CDS location
range 42877 -> 46068
strand +
CDS
ATGACCACCAAGGTGATCTTCACCTTCCATAACCCGGATGGTAGTCCACAGGCCGGAAAAGAGTTTTCCGTCCGACTGACCCGTCCGGGTATGAACGATGCGGATGACTGCATCGTCCTACCTGAAAGCTATGACATGACCACGGATGCTCAAGGTCAGTTCACGATGGATCTGGAGGCAGCTACTTCGGCATACCGGGTTTCCGTAGTGGATGACGACTCGTTCGAGGATGATCCGTGCATTCGCACGTCGTTCACTTTCTACGTGCCGGACTCCCCCACTCCCGTTCATGTACAGGAACTGATCCTGCTGCCTCCGCCCACGTCTCTGCCGTGGGACGAGGCAGCCATGAACAAGATCACCCAAGCTGTCGTAGATGCACGCGAGGCCCGTGACGAAGCCGAAGGTCATGCTGATCGTGCCGAAGAGCAGGTAGATCTGGCCAAAGCCGAGGTCGTTAAAGCCCAAGCTGAAGTCGTCAAGGCCAAGGATGAGGTGACCAAGGCACAGGCTGAAGTAGCTAAAGCTGCCCAGCAGGTTGAGCTTGCAAAGGTTGAAGTAGGTAAGGCGGGAGCCTCTGCTGCTGCGGCCAAGGTCAGCGAAACCAATGCCGCGAATTCCGCTGCTGGTTCTGCTGCTTCGGCGACTGCTGCGACCAACCAAGCCAACCGTGCGAAGACGGAAGCTGATCGTGCCGAATCCCTGGCAAACCAAGTTGCCGAGAAGGTAGAAGGCGGCAACCTACCTGCACTGGTAGGAATGAACGAAACCTTCACCTACGAAGGCGGCGAGGATCATTACAACTGGACCCGAACCGGTCCGGTGAATGTGTCTCAGCACACTGGTTTCATTCGGATTTCCAAAACCGATGCCTCCGGTTCCCGTTCTTTCATTCGAAAGTCTGTCGAGTTCCCGGATGGGCACTGGATCACCTACTTCCGGGTGAAGACCCAGACGGGTACTGCTGCACAGAACAACTCGGCCCAGATCCGGTTCCTCTCTGCCGATGGCAAGGACTACACGGTTTACTTCAACATCAATGCCAATGGCTTGGTGGAACCGAACACCATCCATATGCAAGGTAGCGAGGGTGGGGCACGTAATGCCGCCACCATGTTCACTGGCTTGAATACCGAAGCCTGGATGGACATGGCAGTAAAGTTCGATGCCGTGAACCGCCACATTGAACTCTTCCGCCGTATGCCCAATGGCACCTGGCAGAAGGGTGGCGGTCGCTTGATGGTGGACACGATCAAGCCTGCGATCATCGAGATCTCTTCCATGCCTGTCGCACCCAATGGGTGGTGGATGGACGTGGACTTCATCACGGTTTGCCGACCGAACCTCATCTGCTACGGCGACAGCATTGCTGCCGGTCAGAACGAGTACGGGGTAACCCGAGGTACTGCGGATTACCACAACAACCGTAACTGGGCAGGAACCTGGTTTGGCCAGTCCAGCCTGTATGCCACCAACCGGAACAACCTGGTTCTGGTCCAGGGTGTAGAGGGCCGGCGTACCTGGCAGTATCTGGATAGCCTGGGTGAGATCGAGAACTCCGGTGTGAAAGTGGTGTTCCTGCATGCAAGCACGAACGACCACAAAGACGCCACCATGACCATGGCCAAGCGTACTTCGGACACCCAAGCCATCGTGGACCGACTGCATGCTGTCGGTGCTCAGGTGGTTCTGTTCAATGCCATGCAAGGCACCAAGTTGTTCAACGATTCGTTGGCCGAAGGGGTTACCAAGCTCAAGGCGTACACCGATCAGTGGTGGTCCGAGGAACTGCATAAGGTCACTGGTTTGGGACAGGTTCTGGACATCGCCCGTGTGGTAGGCAAGGACGGTTACTTCGACCCTGCTATCGCTGCGGATGACGGTCTTCACCTGACTGCTGCATCTGCGAAGAAGATCGCCGACAAGCTGGGGCAGTTCTACTCGAACTCCACTTCCATCAATGGTTTGGCTCCTCTGGAAAGCCCTGCGTTTACCGGTATTCCTACCGTTCCAACGCAGACTCCTTTCCTGCCTTACGGCAAGCAGATCGCCAACACCGAGTACGTCATTACCTTCATTCAGGACTGGACCAGTAACTACGGTTACGGTGACCTGACGATGCGTAACAAGACCGGTGCTCAGATGGCAGCTGGTGGTGTTCGTAGTGGTTACTACTACGTTCCTGGGGATTCTTCTAACCCCCTACCGGGAAACATCTATGCATTCGTGCATCACATGTCCTACGACAACAACAAGGGTTGGGAACTCTGGAACCAATGCTATTCCGACCGCATGTACATGCGTTATTCGAACAACCAGGGTGTCTGGCAAACTCCGGTGGAGGTGGTCACTGAGAAGTGGATGGATCGCAATAGCTTCATGACCCCACGGGTTACTGCGTTCAACCGTTTGCCCGTGGCTTCTGCTGCCGGTTATGAAGGGGTTGTCCCCCTGCAAGCTGGGTCCAGTGGTGCATGGCGTAACTTGAACGCCGGTTCTGCCGGGATCGGGTTGCTGGGTGCTGCTACGGTCGAGAATGCGTTGAACTACATCGGTGGTACTCCGAAGACGATGACCAGTCTGCGGTCCTACAGCGATGCCAACGCCATCCCGAATGAGTGTGGCTTCTACGGTGTTGGGATTGCACCCTGGGCGAACTTGCCTCCAGGTGTAACCTCCATCAACCCGGTGGGTTCTACCATCTACCATCAGGTTTACGATGCCAGCACTGCTACGCAGATCTTCATTCCTCGTACTTCGGATATCTGCTATTTCCGCCGTAAGGCTGCGAACGTCTGGAGTCCTTGGGTACGCTATCTGACCGATAAGCAGTTGGTAGGCACCACTACCAACAGCAGCACCGGGGAACCGAACGGTGCCATCATGGAAAGCGGTACAACTGCCAATGGCTGGTACATCCGATTCGCTGATGGGACTCAAATGGCAGGTGCAAGAACTGAACCTGGTCTGCCCGCTGGCGCCAATGTGATACGGTTGCCTGCCTCTTTCGTGTCTGGCTTCAATACCGCAGTAACCTGCAACTGGATCCCCTCTTCCAACTGGCCTACCAACGCTGGCCAAGGGGTTCGGGGGGCTTACCTGAATAGTGGTAGCACTGTTTCTTTTGCTACTGCTCAGGCAGCTGGGGCTAACGACACTATCATGATCATGGCCGTAGGGAGATGGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9487f2250ddfc92c6c2627e44efe17f931b27dc86f5cc4c731c885b25f964099
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6596
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of Pseudomonas phage vB_PaeS_TUMS_P6 Kamyab,H., Torkashvand,N., Shahverdi,A.R., Khoshayand,M.R., Sharifzadeh,M. and Sepehrizadeh,Z. 2023-04-25 — GenBank