Protein

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Genbank accession
YP_010106991.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADQSFVSDIRGFALSGSMDGLTVSAGPGVCYMKDGRRLINSTLLTYTIPAPVLGFVSAYAVPAPTGRMAALQVVSGDPAAAYLGTARHMPGNEFSRYLGSGMIVNVGNQLRLRPGRHLQVLPQGSMVMLDMASSTGGIPYNLLSGLTASTVQTLDLSGIVPITSRCARIQVMNGSNRAIYIGLASRGTVSKTNHLFEVLPGASPLLDVPLDPNRTCTLVQTTDSLLGLLGAILSGSSRVNCAGYYYDR
Physico‐chemical
properties
protein length:249 AA
molecular weight: 26144,86890 Da
isoelectric point:9,17967
aromaticity:0,06024
hydropathy:0,21727

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage FoX4
[NCBI] 		2723900 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010106991.1 [NCBI]
Genbank nucleotide accession
NC_055839.1 [NCBI]
CDS location
range 42647 -> 43396
strand +
CDS
ATGGCAGATCAGTCCTTCGTTTCAGATATTCGCGGTTTTGCTCTTTCCGGATCCATGGATGGCCTGACGGTTTCAGCTGGCCCCGGCGTCTGCTACATGAAGGACGGTCGCAGGCTCATCAACAGCACGCTGCTGACCTACACGATCCCGGCGCCGGTGCTGGGGTTCGTGTCCGCCTACGCAGTGCCGGCGCCCACCGGTCGCATGGCGGCGCTGCAGGTGGTCAGTGGCGACCCTGCCGCTGCATACCTGGGCACGGCGCGCCACATGCCGGGCAACGAATTTTCCCGTTATCTCGGCAGCGGCATGATCGTCAACGTGGGCAACCAGCTGCGCCTACGTCCAGGTCGACACCTGCAGGTCCTGCCGCAAGGCAGCATGGTGATGCTGGACATGGCCAGCTCCACCGGCGGCATCCCCTACAACCTGCTCAGCGGCCTGACCGCCAGCACCGTGCAGACGCTGGATCTCAGCGGCATCGTGCCGATCACCTCGCGGTGCGCGCGGATCCAGGTCATGAACGGATCCAACCGGGCGATCTACATCGGCCTGGCGTCGCGCGGCACGGTGAGCAAGACCAACCATCTGTTCGAGGTCCTGCCGGGCGCGTCACCGCTGCTCGATGTGCCGCTGGATCCAAACCGCACCTGCACGTTGGTGCAAACTACCGACTCGCTGCTGGGTCTTCTCGGCGCAATCCTCAGCGGATCCTCCAGGGTCAACTGCGCCGGCTACTACTACGACAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0328e7c9eeac0baee35a2a3dbe06b4ee253897886c27d0ef26d53626571f113
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of an integrated pest management strategy to control Xanthomonas campestris pv. campestris by using bacteriophages Holtappels,D., Rombouts,S., Lavigne,R. and Wagemans,J. 2022-01-27 — GenBank