Protein

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Genbank accession
QDF17568.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADRLPAIDTTLPPGQRFPAVVRDEIAVVASAMVTKSSIGLGNVDNTSDLNKPLSSAAQEALNAKVTKIAETNKAYGTNSAGADNAWSISSSATSTTLALRGTGGTLQVGTATAANHAVTKAQLDAVAASGGVQDGGVTTAKIADGAVTLAKFANEVGPEMSAIAATEAASYVNNVLLPIAGAELGDGAVTTTKLGDLQVTSAKLADGAVNSSKIANGSVALVDLASSVQTSLGKAAAALAGQNGATAIWTGTLAQLPVTGAAGVVYFVVG
Physico‐chemical
properties
protein length:271 AA
molecular weight: 26535,45940 Da
isoelectric point:4,96292
aromaticity:0,02952
hydropathy:0,26458

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDF17568.1
1 271
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,8443
Central domain 231 260 31 0,0027
C-terminal 261 271 10 0,9306
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-260
C-terminal
261-271

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Yago84
[NCBI] 		2571254 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF17568.1 [NCBI]
Genbank nucleotide accession
MK801725 [NCBI]
CDS location
range 32078 -> 32893
strand +
CDS
GTGGCTGACCGCCTGCCCGCCATCGACACCACGCTGCCGCCGGGCCAGCGCTTCCCTGCCGTCGTCCGCGACGAGATCGCGGTGGTGGCCTCGGCGATGGTCACCAAGTCCAGCATCGGTCTGGGCAACGTCGACAACACCAGCGACCTGAACAAACCGCTCAGCTCAGCCGCCCAGGAGGCGCTGAACGCCAAGGTCACCAAGATCGCGGAGACAAACAAGGCGTACGGAACCAACAGCGCCGGGGCCGACAACGCCTGGTCTATCTCGTCGTCGGCCACCTCGACCACCCTCGCACTGCGCGGCACCGGCGGCACCCTGCAGGTCGGCACAGCTACGGCGGCCAACCACGCGGTGACCAAGGCTCAGCTCGATGCGGTCGCAGCCAGCGGCGGCGTGCAGGACGGCGGGGTGACCACGGCCAAGATCGCCGACGGCGCGGTGACCCTGGCGAAGTTCGCCAACGAGGTAGGCCCGGAGATGAGCGCCATCGCGGCGACCGAGGCAGCGAGCTACGTCAACAACGTGCTGCTGCCGATCGCGGGGGCTGAGCTGGGCGACGGGGCGGTGACCACGACCAAGCTCGGGGACCTGCAGGTGACCTCAGCCAAGCTCGCCGACGGCGCAGTGAACAGCTCCAAGATCGCCAACGGGTCGGTGGCCCTGGTCGACCTCGCATCGTCCGTGCAGACCTCGCTGGGCAAGGCCGCCGCCGCGCTCGCCGGGCAGAACGGGGCGACGGCCATCTGGACCGGCACCCTGGCGCAGCTGCCGGTCACTGGCGCGGCGGGCGTCGTGTACTTCGTGGTGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
80813c9d4312fe47c59fc9eb01981210920970d9f1815c71ca9cc440562fcecc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50