Protein

View in Explore
Genbank accession
GENB_c00a9ace8990 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVSNPLLTFAATNDVIDNTTEITTDKETSSTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAVFEMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLDLSKNTNLTYLECNSNKLTNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNLTKLDLNQNIKLTFLDCSSNKLTEIDVTPLTQLTYFDCGVNPLTELDVSTLSKLTTLECIQTDLLEIDLTHNTQLTNFKAEGCRKIKDLDVTHNTQLYSLDCQGAGITELDLSQNPKLVYLYLNNTELTKLDVSPNTKLKKLFCENTHVQDFSSMRNIAALNNNLYAEGQTITMPKETLINNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSANGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGYTLTTTPNNATGTFNTSSQTVTYVYTKNIEAAEPVTVNYVDATGKTLAPSETLNGNVGDTYNATAKQIDGYTLSTEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDENNKQLSSATEISGTVGNNYTTEPKTIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIEAAEPVTVNYVDANGKTLAPSETLNGTIGDTYNATAKQIDGYTLSAEPTNATGQFTNSAQTVNYIYTKNTNIDQPLPDKKPTNTTPTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK
Physico‐chemical
properties
protein length:906 AA
molecular weight: 98703,24030 Da
isoelectric point:4,49752
aromaticity:0,06512
hydropathy:-0,44845

Domains

Domains [InterPro]
IPR032675
STR
45–407
IPR032675 IPR054717 G3DSA:3.10.20.320 G3DSA:3.10.20.320 G3DSA:3.10.20.320 G3DSA:3.10.20.320 G3DSA:3.10.20.320 DC_1347
GENB_c00a9ace8990
1 906
Architecture
STR
RBD
STR 45-490 | RBD 491-906
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LM 4-14-1
[NCBI] 		3113836 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OR848132.1_CDS_[11041..13761] [NCBI]
Genbank nucleotide accession
OR848132.1 [NCBI]
CDS location
range 11041 -> 13761
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
9ebf35470a056ce1df59be12cc33be92d7b3828c5022e18a87fb6c4bfee061ca

                    

                    
                      AlphaFold3
                    
                  

                  

                  

                    

                      Source
                      AlphaFold3
                    

                    

                      Method
                      AlphaFold3
                    

                    

                      Resolution
                      0,8860
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50