Protein

View in Explore
Genbank accession
YP_010092011.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MQNTYKHISDSSSFVTFNPVGTQWDQSIKDVQTALSKIGSWAMIGKGLPISTETLNGIIRTATRDEVLKGQGSGAVTPKYLEERLAHPQATETVLGLTKYANNSETLAGTLNNKAVVPTGLKHTLDSRTSTEGRTGLIKISSLSAAAQGVDDTTAMTP
Physico‐chemical
properties
protein length:158 AA
molecular weight: 16777,66330 Da
isoelectric point:7,98713
aromaticity:0,04430
hydropathy:-0,32405

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage PM2
[NCBI] 		2025809 Uroviricota > Caudoviricetes > Pantevenvirales > Bragavirus > Bragavirus pm2
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010092011.1 [NCBI]
Genbank nucleotide accession
NC_055727.1 [NCBI]
CDS location
range 70035 -> 70511
strand +
CDS
ATGCAAAATACATATAAACATATAAGTGACAGCTCATCATTTGTCACATTTAATCCAGTAGGAACCCAATGGGACCAATCAATTAAAGATGTTCAAACAGCTTTATCAAAGATTGGTTCTTGGGCTATGATAGGTAAGGGATTACCTATTTCAACAGAAACATTAAATGGTATAATTAGAACCGCCACTAGAGATGAAGTTTTAAAAGGCCAAGGTTCAGGTGCAGTAACTCCAAAATATTTAGAAGAACGACTAGCTCATCCACAAGCAACTGAAACCGTTTTAGGATTAACCAAATATGCTAATAATTCTGAAACACTAGCTGGAACCCTTAATAATAAGGCTGTTGTTCCAACTGGGTTAAAGCATACTTTAGATTCCAGAACTTCAACTGAAGGAAGAACAGGTTTAATTAAAATTTCTTCTTTATCAGCCGCAGCACAAGGTGTTGATGACACAACGGCCATGACCCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6880950d489955e089785a9ee48cce1419915e1c537159408d26719dca74f765
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7537
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage PM2 Infecting Proteus mirabilis Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-03-15 — GenBank