Protein

View in Explore
Genbank accession
QBX27341.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MDLIIHDAKLKKVAYIDNELQDTLSFYDDKWSRYLDTASSTFEFTVYKNGIKSDTVKEKAYQSLSERSFVSFKYHKKTYLFSVMKTEENENTIRCECENLNLELLNEMAGPYKAPTEMSFIDYCNKFFLLIGGAITIGHNEIEDRERTLEWTGTDTKHKRLLSIANMFDAEIEFETILNEDSSLKSFVMNIYKANDNKNQGVGKKRDDIQLNYGYNISGVTRKIDKTGIFNMITPTGKATVDVKVTKANPKYVAPQLGTVNYNGGSISNAGRTISKELVGQILNLCIQHKLLPSGVFSQLYLESWWGNSPVARADNNWGGLTWAGSTTRPSGIKVTQGTARPANEGGYYMHFASVSDYMKDYTYLLAEQGIYKVKGANNIDAYTKGLFRVGGATYDYAAAGYAHYAPLMRSIRGGINSASNGAMDTLDNQFKTAGTVGTAPVSQIATKTKNALAQLGAIKGQRVGSGQCYALSALYSLKLGGAGLGGGVTGFRGLIGAGAAASHIGEDYNWSQFGWKVVRPSEVKHLIPGSIANIRANAGGPVYTGGWGHTVVIKGLSGDTLTVLEQNYAGHQFVEERTYSASQYLGVIQTLCYPPEIVHGKRVDGTESAPAPSGSTGNNEPSTITETQSKEVITRIPTDLYREWKNEEGVVEFYVKNGSLYAPLSKELYPSAFSGDVVGDNWIKKSVELQTTDVELLISSSLAELRKNCYPSISYDVKGSSEELDIGDTVKVIDEGFQNGLVLTARVSEQHISFTNPTSNQTIFDNYKALRNKLSKDLTDRYAELSESVQPYNLVLNAGTTTFKNNTGTSTVFAYLWKGTQRIEATYQFRNGDVLLNSGDSYTVNGTDVNPSLVITVDAFVGSELVATKQITFVNVIDGVNGEDGLTVWKAWSDSADGSTGFSTSNSTNKRYEGTYTGLTQSANYGDYTWTDRNAGILDTFYSVGTIYTSALDTNPALIMGGTWEAMDNSANPSEYKWERIA
Physico‐chemical
properties
protein length:983 AA
molecular weight: 107773,09320 Da
isoelectric point:5,61157
aromaticity:0,10376
hydropathy:-0,36633

Domains

Domains [InterPro]
DC_0558
ATT
1–403
DC_0558 G3DSA:3.90.1720.60 IPR053827
IPR007119
Unmapped
57–244
IPR007119 IPR002901 IPR007921
G3DSA:1.10.530.10
RBD
275–411
G3DSA:1.10.530.10 DC_0002
IPR002901
ENZ
285–397
IPR002901
QBX27341.1
1 983
Architecture
ATT
STR
ATT
STR
ATT 1-403 | STR 404-937 | ATT 938-968 | STR 969-980 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX27341.1
1 983
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,9092
Central domain 270 468 200 0,5736
C-terminal 469 983 514 0,0888
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-468
C-terminal
469-983

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan384
[NCBI] 		2548140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parauberis KCTC_11537
[NCBI] 		936154 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus parauberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27341.1 [NCBI]
Genbank nucleotide accession
MK448924.1 [NCBI]
CDS location
range 29891 -> 32842
strand +
CDS
TTGGATTTAATTATTCATGACGCAAAATTAAAAAAAGTTGCATATATTGATAACGAGTTACAAGACACACTTTCTTTTTATGATGACAAGTGGTCACGTTATTTGGATACTGCATCATCAACATTTGAATTTACGGTTTATAAAAATGGTATCAAATCAGACACAGTAAAAGAAAAGGCCTATCAGAGTTTATCTGAAAGGTCTTTTGTTTCGTTTAAATATCACAAGAAGACTTATCTGTTTAGCGTTATGAAAACAGAGGAAAACGAAAACACAATAAGATGTGAATGCGAAAATCTCAATCTTGAATTGCTAAATGAAATGGCAGGTCCATATAAAGCGCCGACAGAAATGTCGTTTATTGATTATTGTAATAAATTTTTCTTACTTATCGGTGGAGCTATTACGATTGGTCATAATGAGATTGAAGATAGAGAACGAACACTAGAATGGACTGGAACAGATACCAAGCATAAGCGTTTGTTATCTATTGCTAATATGTTTGATGCAGAAATTGAATTCGAAACTATTCTAAATGAAGATTCTAGTTTGAAATCGTTCGTTATGAATATCTACAAAGCTAATGACAACAAGAATCAAGGAGTTGGCAAAAAACGTGATGATATCCAACTTAATTACGGTTATAACATTAGTGGCGTCACTAGAAAAATAGACAAAACTGGCATTTTCAACATGATCACACCAACAGGGAAAGCAACTGTTGATGTCAAAGTAACTAAAGCGAATCCTAAATATGTAGCGCCACAATTGGGGACCGTTAACTATAACGGCGGTTCAATCTCAAATGCAGGTCGGACAATCAGCAAAGAATTAGTAGGTCAAATACTAAATCTATGTATCCAGCATAAGCTATTACCATCTGGTGTATTTTCTCAGTTATATTTAGAATCTTGGTGGGGTAATTCCCCAGTCGCAAGAGCTGATAATAACTGGGGTGGACTTACTTGGGCTGGATCAACGACTAGGCCGTCAGGCATTAAAGTTACTCAAGGTACTGCTCGTCCGGCCAACGAGGGCGGTTATTATATGCATTTTGCAAGTGTGTCCGACTATATGAAAGACTACACTTACTTATTAGCAGAACAGGGCATCTACAAGGTCAAAGGTGCTAACAACATTGACGCTTATACAAAAGGTCTATTTCGTGTCGGTGGAGCGACTTACGATTATGCAGCAGCAGGGTATGCACACTATGCGCCTTTAATGCGGTCGATTCGTGGTGGTATCAATAGCGCTTCTAATGGTGCTATGGATACGCTCGACAACCAATTCAAAACAGCTGGCACGGTTGGTACTGCACCAGTAAGTCAAATAGCAACCAAAACAAAAAATGCTTTGGCTCAACTTGGAGCGATTAAAGGTCAGCGTGTTGGATCTGGTCAGTGTTACGCTTTATCAGCTTTGTACTCACTTAAATTAGGTGGTGCAGGTCTTGGCGGTGGAGTTACTGGTTTTAGAGGATTGATTGGAGCAGGTGCTGCCGCCTCACATATCGGTGAGGACTACAATTGGTCGCAGTTTGGCTGGAAAGTTGTTAGACCTTCTGAAGTTAAGCACTTAATTCCGGGATCAATCGCCAACATCAGAGCTAATGCAGGCGGTCCAGTTTATACTGGTGGCTGGGGGCATACAGTAGTTATCAAAGGATTGTCAGGCGATACATTGACAGTCTTAGAACAAAACTACGCAGGCCACCAATTTGTAGAAGAGCGCACATATAGTGCGAGTCAATATTTAGGTGTTATCCAAACATTATGTTACCCGCCTGAAATTGTACACGGTAAGCGAGTAGATGGCACAGAGAGCGCACCAGCGCCGTCTGGGTCAACTGGGAATAATGAACCATCAACAATTACAGAAACACAATCTAAAGAAGTTATCACACGTATACCAACCGATTTATATCGTGAGTGGAAAAATGAAGAAGGTGTAGTTGAGTTTTATGTAAAAAACGGTTCCTTATATGCGCCATTATCCAAAGAACTTTACCCATCAGCGTTTAGTGGTGATGTTGTCGGTGATAACTGGATTAAAAAGTCCGTGGAGTTACAAACAACAGATGTTGAATTATTGATATCAAGTTCGTTGGCTGAATTAAGAAAAAACTGCTACCCGTCGATTTCTTACGATGTGAAAGGTTCGTCCGAAGAATTAGATATCGGGGATACTGTAAAAGTTATTGATGAGGGCTTCCAAAACGGATTAGTGCTAACCGCTCGAGTATCCGAACAACATATAAGTTTTACAAATCCAACAAGCAACCAGACGATTTTTGATAATTATAAAGCATTGCGGAACAAGTTGAGTAAAGATTTGACTGACCGTTACGCTGAATTGTCGGAATCTGTTCAACCATACAATTTGGTTTTAAATGCTGGGACAACAACTTTTAAAAACAATACTGGAACATCAACGGTATTCGCTTATTTGTGGAAAGGCACTCAACGAATTGAAGCTACTTACCAATTCAGAAATGGAGATGTTTTGCTTAACAGTGGGGATAGTTATACTGTTAATGGTACAGACGTTAATCCGTCGCTAGTTATTACAGTAGATGCCTTTGTCGGTAGTGAATTAGTAGCTACTAAACAGATCACATTTGTAAATGTAATTGATGGTGTTAACGGCGAGGATGGTTTGACAGTTTGGAAAGCTTGGTCAGATAGTGCTGATGGTTCAACTGGTTTTAGCACCAGTAATTCGACTAATAAAAGATATGAGGGAACTTATACTGGACTAACTCAATCAGCCAATTACGGTGATTATACATGGACAGATAGAAACGCTGGCATATTAGATACGTTTTATTCAGTAGGCACTATTTATACAAGCGCACTCGATACCAACCCTGCATTAATAATGGGGGGGACTTGGGAAGCTATGGATAACAGCGCTAATCCAAGCGAATACAAATGGGAAAGAATAGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a3bb8b5e605ab6444df802ee88744ee7b5a0239eae52b0f0dc6c618387a28cd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7967
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank