Protein

View in Explore
Genbank accession
UFD98114.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MIGELERVEEPGYHYRIDVGGSKDVFLLRLHTDVCELSFINAQALPFNYQKITLILEQQRGAHKVTWPANVSWPMKHIPILSNQKGEIDTIELVSYDGGNTWFGYFTGAGFKYTTSS
Physico‐chemical
properties
protein length:117 AA
molecular weight: 13296,91720 Da
isoelectric point:5,73474
aromaticity:0,12821
hydropathy:-0,24615

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BX-1
[NCBI] 		2894594 No lineage information
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFD98114.1 [NCBI]
Genbank nucleotide accession
OK428602.1 [NCBI]
CDS location
range 53252 -> 53605
strand -
CDS
ATGATAGGTGAATTAGAACGTGTTGAGGAACCAGGTTATCATTATCGCATCGATGTTGGTGGTAGCAAAGACGTGTTTTTATTGCGTTTGCACACCGACGTGTGTGAGCTGTCGTTTATTAATGCCCAAGCGTTGCCTTTCAACTACCAAAAGATAACACTTATTTTAGAACAACAACGTGGGGCACATAAAGTCACATGGCCTGCAAATGTAAGTTGGCCGATGAAGCATATCCCAATTCTATCCAACCAGAAAGGTGAGATTGACACGATTGAGTTAGTCAGTTATGACGGCGGAAACACCTGGTTTGGGTATTTTACTGGAGCAGGATTTAAGTACACCACATCTTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6b06664ead28e0fc6f8093d142d008c54e8a7f085ccccc8c77aab4cffbdd2496
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Biological Characterization of the Fish Pathogen Vibrio alginolyticus AP-1 Li,R., Li,X., Wang,X. and Tan,D. 2019-01-09 — GenBank