Protein

View in Explore
Genbank accession
WEM34502.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MASIKPLYINAAGLEAQAASGDTVPVDYGGTGLSSLTANSYLRAVSSSAFELRTPAQVLADIGALSTTGTAASATILATARTINGTSFNGSANITTSTWGTARTLTIGSTGKSVNGSANVAWSLTEIGAAPTVHTHVSADITDLQTQLSGRVQRGTLQLNPDGTAPATFFNEVSDTLALKYSNNSTGSTGYPTEFGATLSVIMEKQSTRSFDLHMPTNSANNLYFRGYSSAGTPTDWKTIGALQNTNTWTAKQTFAGGVNMANDVLLEYGSGGATIRGSSTGSIILASGAAAGAGIRLRPNGDTSLTGQVAIDTDGIVVATGFSGPLTGNATTATTLATARTINGTSFNGSANITTANWGTARTLTIGGTGKSVNGSANVAWTLAEIGAASADDMLLIGGDNQIGNGNFYTGTAAGWSGGSGSIGSGTAVRSIVDSTLASTGKAYRMDIANFPTTGYIEIISNTNVKIARVQGGERAVVAAYARGSAGVRVFLQIRWNDETGAAISYTGTPNNSSYLTSETWTKYTYSATAPANAVSANLYVRVYGNTAADQWFETSHISMQVGNVSTGYAPSIDELRNDFNNLITTPNVWNQLQTFNGGWTLPNNKFGLIGTGGGSIRGTDTGSVVLSSGTGGSGFIYVRPNGDTSTSFQTVFYATGNVDMPTVRAGASTPNAAGAVMLELVSERSWQFRQRNTGATTQLELFDLTGAKDFVLSNTSNTNVIVMNPTNSSISATTFTGALTGNATTATTLATARTINGTSFNGSANITTSLWGTARNITIGSTTKSVNGSANVSWTLAEIGAVDASGFVKKVGDTMSGDLTVSANVSGQMVRAGFSADLAFAQVRTLGDGSSIVWWESILKSSGGPGGESWYRAKSHVWTNDQGNISATLDTSGTFTAYNVLAAKSFSVTDATATSSIQGNLSINDSLNAKGVMYFGGKVANTGNKIRILNPDTSTSVRIDAVTADASAFAQMNFYASQFTFITGRVGFNAHLNSTATAAVISAQNGGTVYLRPNGADNSNQEVTVGTDGTLNVSGSIRLGGNGRNIRLYDNNVDTACVDIGSGIGTGTDRGGYVINRNAGGELSLWARNGGVQLRLGLRDGVAGAVAQLNVPMLFSAPAMDPGNAATWSILTTGSYGGGVGMRDNAGSGNYFGGMYLGSGQMYIGCGAPNEAGIRASVVIKNDYQWYFTGNTINIEGSSPTIRVYDNDQGYTSWIHHNDGNHGFLAHNSFSWACFRNSGNDWQCQNNIIAYASDRRLKKNIVDAPNDIIEHFFENVRIRQFDWDEEKIAHYKVGIKARVGEVGAVAQEMQAVYSDAVAVNEAHNQIKTKDNPNPLKPDFLTIDWTKTVPLLIAEVQNLRRRVAQLENRA
Physico‐chemical
properties
protein length:1371 AA
molecular weight: 143106,40940 Da
isoelectric point:6,17422
aromaticity:0,08169
hydropathy:-0,15069

Domains

Domains [InterPro]
DC_1592
STR
5–210
DC_1592 DC_0702 IPR030392 Coil
DC_1592
STR
193–618
DC_1592 DC_1954
IPR030392
CHP
1255–1371
IPR030392
WEM34502.1
1 1371
Architecture
STR
STR
STR 5-618 | STR 646-1371
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WEM34502.1
1 1371
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,0495
Central domain 292 490 200 0,3997
C-terminal 491 1371 880 0,7834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-490
C-terminal
491-1371

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage X1
[NCBI] 		2511832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris str. 8004
[NCBI] 		314565 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas campestris

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEM34502.1 [NCBI]
Genbank nucleotide accession
OQ427096.1 [NCBI]
CDS location
range 182655 -> 186770
strand +
CDS
ATGGCCTCCATCAAGCCTCTTTATATCAATGCAGCAGGACTCGAGGCTCAGGCAGCTTCGGGCGACACAGTACCGGTTGATTACGGCGGCACCGGTCTTTCCTCTCTGACTGCAAACAGCTATCTTCGTGCGGTGTCAAGCTCAGCCTTTGAGCTCCGCACACCTGCTCAGGTTCTTGCTGACATTGGTGCGCTGTCTACCACAGGCACTGCTGCTTCGGCGACTATCCTTGCGACTGCGCGCACCATCAACGGAACGAGCTTCAACGGCTCAGCCAACATCACAACCTCAACTTGGGGTACCGCTCGTACCTTGACGATTGGCTCGACGGGAAAGTCGGTAAACGGTTCTGCCAACGTGGCATGGAGCCTGACTGAAATTGGTGCTGCGCCCACTGTTCATACGCATGTATCTGCAGACATTACTGACCTGCAGACACAGCTAAGTGGTCGAGTTCAGCGCGGCACTCTTCAGTTGAATCCGGATGGTACAGCACCTGCCACATTCTTCAACGAAGTCTCTGACACTCTCGCACTCAAATATTCTAACAACTCTACAGGTTCCACAGGATACCCAACCGAGTTTGGTGCAACCCTGTCTGTGATCATGGAAAAGCAGTCAACACGTTCGTTTGACCTGCATATGCCAACCAACTCGGCTAATAACCTCTACTTCCGAGGCTATTCGTCGGCAGGTACACCAACTGATTGGAAGACCATTGGTGCCCTGCAGAATACCAACACCTGGACTGCAAAGCAGACTTTCGCCGGTGGTGTGAATATGGCCAACGACGTACTCCTTGAGTACGGTTCGGGCGGCGCAACAATCCGCGGCTCGTCCACAGGATCAATTATCCTGGCATCAGGTGCCGCTGCAGGTGCAGGTATTCGCCTCCGCCCAAACGGTGACACCAGCCTCACTGGTCAGGTTGCCATTGACACTGATGGTATCGTAGTCGCAACTGGATTCAGCGGTCCTTTGACTGGCAATGCTACAACGGCTACCACGCTTGCTACTGCGCGCACAATCAACGGCACATCCTTTAACGGATCAGCTAACATCACTACCGCTAACTGGGGTACCGCTCGTACTCTAACCATCGGTGGCACAGGAAAGAGTGTCAATGGCTCAGCCAACGTAGCTTGGACCCTTGCTGAGATTGGTGCGGCGTCTGCTGACGACATGCTTTTGATCGGTGGCGACAACCAAATCGGTAACGGTAACTTCTACACAGGCACGGCTGCAGGTTGGTCGGGTGGCAGTGGTAGCATCGGAAGCGGAACTGCTGTTCGTTCTATCGTTGATAGCACTCTTGCGAGTACGGGTAAGGCATATCGAATGGATATTGCCAATTTCCCTACCACAGGTTACATTGAAATCATCTCCAACACCAACGTCAAGATTGCTCGTGTTCAGGGCGGCGAAAGAGCTGTCGTCGCAGCATACGCTCGTGGATCGGCAGGCGTTCGTGTCTTCCTACAAATCCGTTGGAATGATGAAACAGGCGCAGCTATCTCCTACACGGGTACACCTAACAATTCATCTTACCTAACGTCCGAGACCTGGACAAAGTACACCTACAGTGCTACGGCACCTGCCAATGCTGTATCTGCAAACCTTTATGTCCGAGTCTATGGCAACACGGCAGCTGATCAATGGTTCGAGACGAGCCATATCTCAATGCAGGTTGGCAATGTAAGCACAGGCTATGCACCGTCCATTGATGAGCTGAGAAACGATTTCAACAACCTGATTACCACTCCAAATGTCTGGAATCAATTGCAGACATTCAACGGAGGTTGGACTCTACCAAACAACAAATTCGGATTGATCGGTACCGGTGGCGGATCGATCCGAGGAACTGACACAGGTAGCGTTGTACTGTCTTCGGGCACAGGTGGCAGCGGTTTCATCTACGTTCGTCCTAACGGTGATACCAGCACCTCATTCCAGACAGTGTTCTATGCCACAGGCAATGTGGACATGCCAACCGTTCGTGCAGGTGCATCTACTCCTAATGCCGCTGGCGCTGTAATGCTTGAACTTGTGTCTGAGCGCTCATGGCAGTTCCGTCAGCGCAACACAGGTGCGACAACTCAGCTAGAACTGTTTGATTTGACAGGAGCTAAGGACTTTGTCCTGTCCAACACATCAAACACGAACGTCATTGTGATGAACCCGACCAACAGTTCGATCAGTGCAACGACGTTCACTGGAGCGTTGACTGGTAACGCAACAACTGCAACAACTCTTGCAACTGCTCGTACAATCAATGGTACATCGTTCAATGGTTCGGCGAACATCACTACATCTTTGTGGGGTACTGCTCGCAACATCACAATCGGTTCGACAACTAAGAGCGTCAACGGTTCGGCTAACGTGTCTTGGACCCTGGCTGAGATTGGTGCGGTAGACGCATCAGGCTTTGTCAAGAAGGTCGGCGACACTATGAGCGGTGACCTCACCGTTTCTGCGAATGTCAGTGGCCAGATGGTTCGTGCAGGTTTCTCTGCCGACCTTGCATTTGCTCAGGTCAGAACCCTTGGTGACGGTTCGAGTATCGTTTGGTGGGAATCTATCCTGAAGAGCTCAGGCGGACCGGGCGGCGAGTCTTGGTACCGTGCAAAGTCTCACGTATGGACGAACGATCAGGGTAACATCAGTGCTACTCTGGACACATCAGGCACCTTTACCGCATACAATGTTCTTGCCGCAAAAAGTTTCTCTGTCACAGATGCAACCGCAACAAGCTCGATCCAAGGCAACCTGTCTATCAACGATAGCCTAAACGCCAAGGGTGTGATGTATTTCGGTGGTAAGGTTGCTAACACCGGCAACAAGATCCGTATCCTAAACCCTGACACATCTACCTCTGTGAGAATTGACGCTGTAACTGCAGACGCATCTGCATTTGCACAGATGAACTTCTATGCATCACAGTTCACATTCATCACCGGACGCGTTGGATTCAACGCTCACCTCAACTCTACAGCCACTGCAGCTGTTATTTCTGCTCAGAATGGCGGCACAGTATACCTGAGACCGAATGGTGCCGATAACTCAAACCAAGAAGTCACCGTAGGCACCGACGGTACACTGAATGTCTCTGGTAGTATCCGCCTTGGGGGTAACGGTCGTAACATTCGTTTGTATGATAACAACGTAGACACTGCGTGCGTTGACATTGGTTCGGGTATTGGTACAGGTACTGACCGAGGTGGCTATGTCATCAACCGAAACGCTGGCGGTGAACTATCTCTTTGGGCTCGTAACGGTGGTGTCCAGCTGCGCCTCGGTCTTAGAGACGGTGTCGCAGGTGCTGTAGCACAGCTCAACGTTCCTATGCTCTTCTCTGCACCAGCTATGGATCCTGGAAACGCTGCAACCTGGTCGATCCTAACCACCGGTTCCTACGGTGGTGGCGTTGGTATGCGCGACAATGCGGGTAGCGGAAACTACTTCGGTGGCATGTATCTCGGCTCTGGGCAGATGTACATCGGTTGTGGTGCACCAAATGAGGCAGGTATTCGTGCTTCGGTTGTGATCAAGAACGATTACCAATGGTACTTCACAGGTAACACTATCAACATCGAAGGTTCCTCGCCTACTATCCGTGTCTACGATAACGATCAAGGCTACACCAGCTGGATCCACCACAACGACGGTAACCACGGATTCCTGGCACACAATAGCTTCTCTTGGGCATGTTTCCGTAACTCAGGAAATGATTGGCAGTGCCAGAACAACATCATCGCCTACGCATCTGATAGGCGCCTTAAGAAGAACATCGTTGATGCACCGAACGATATCATCGAGCACTTCTTCGAGAATGTCCGCATCCGACAGTTCGATTGGGATGAAGAGAAGATTGCTCACTATAAGGTAGGCATCAAGGCACGAGTTGGTGAGGTGGGTGCTGTGGCTCAGGAAATGCAGGCGGTCTATTCTGACGCTGTTGCAGTCAATGAGGCGCACAACCAGATCAAGACCAAAGACAACCCTAATCCTTTGAAGCCAGACTTCTTGACCATTGACTGGACAAAGACTGTTCCGCTTCTAATCGCCGAAGTACAGAACCTGCGCCGCAGAGTTGCACAATTGGAGAACCGAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc542ea0f5f43874d11b8352a00d4fbdb5b8064c9b36004c49b09d26839f4428
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50