Protein

View in Explore
Genbank accession
YP_009177306.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAEYKLSELNTIDTVRSDDLLHLRVIKRSDMLGDEDRKMTYANFLASFRLERFLQLAGGNMTGNLGIVKLTYGGKDLLDPTGSSEIILGDVAKTFKINANGLALKVADATRTAFVYHTLNKPSPADLGMRSNSENDERYAQKATENTFLARQIININGVGLTLKSIYPDAGAFIEARDSSNNLRFTVGNLDASNDVTLVNSKGAKLTLGTTTVSVDKTFTVNGQVQPNDWGNFDARFFTQSAADLRFARLAANNTMTGSNIFTNYQTITADGALLRLKPSTTNGAVFMQAYNGSGAEAWYLGQPDGTKQDINLFNQMTSAAMRISTEFFFSKALNVTGQVKPSDFTNFDSRYVPSSLTNVLARTNAANTFNGYQTFLSDETPIVLKNVTLNAPLYIASMNANNVRRWYIGNGSQNNPETLFIANDTTGAAITLNNTVNITKTVGITGQVQPTDLSNFDSRYFVKTKLLTQSLMTRSANNVSEPTAVSLAYSGFIRNNGVSVALQDLAIHVGHPERSDAGHSRGISFQYGSKGLAAWTYAFGADGSFAGEAQLYTTAFKPTPSDIGAYTKAETDQKIATAITNSTDLNKIYPVGMVTFFASNVNPNTTFAGTTWTYLSNGNQRTIRIANPNGSDVGAVGGSDSKSIAVGHLPSHTHSFSATTSSFDYGTKGTNVAGWHGHTVSGSTAGAGSHSHNVAVRYLNTSQQYAYVGAAGQWAGVAGNQATEAVGNHTHTFSGSAAGDGNHSHTVAIGAHSHTVSGTTGGTGSGSAFDVTNAFIKLMAWVRTA
Physico‐chemical
properties
protein length:786 AA
molecular weight: 83867,01310 Da
isoelectric point:8,32011
aromaticity:0,09160
hydropathy:-0,25064

Domains

Domains [InterPro]
DC_1566
STR
60–786
DC_1566
IPR048388
ATT
161–245
IPR048388 G3DSA:6.20.80.10 IPR048388
IPR048388
ATT
273–357
IPR048388 G3DSA:6.20.80.10
YP_009177306.1
1 786
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 60-160 | ATT 161-245 | STR 246-272 | ATT 273-357 | STR 358-381 | ATT 382-465 | STR 466-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Michonne
[NCBI] 		1675603 Uroviricota > Caudoviricetes > Andersonviridae > Mooglevirus > Mooglevirus mordin
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009177306.1 [NCBI]
Genbank nucleotide accession
NC_028247.1 [NCBI]
CDS location
range 35214 -> 37574
strand -
CDS
ATGGCTGAATACAAACTAAGTGAACTAAACACAATTGACACAGTTCGCTCAGACGACCTATTACATTTGAGAGTAATTAAAAGGTCAGACATGCTAGGTGATGAAGACCGTAAAATGACCTATGCAAACTTCTTAGCTTCATTCAGACTTGAAAGATTCTTGCAATTAGCTGGCGGGAATATGACAGGTAATCTGGGTATTGTTAAATTAACTTACGGTGGAAAGGACTTATTAGACCCAACAGGTTCTTCTGAGATTATTTTAGGGGATGTTGCCAAGACTTTTAAAATTAACGCTAATGGGCTAGCTTTGAAAGTTGCTGATGCAACAAGAACAGCATTTGTTTACCACACTCTTAATAAACCAAGTCCTGCTGATTTGGGTATGAGAAGTAACTCAGAAAACGATGAAAGATATGCACAGAAAGCTACAGAGAATACTTTCTTAGCAAGACAGATTATTAACATTAATGGTGTTGGTCTGACTCTGAAAAGTATTTATCCAGATGCTGGAGCATTTATCGAAGCAAGAGACTCATCAAACAACTTAAGATTCACTGTAGGTAACCTTGATGCAAGTAATGATGTAACTCTTGTTAATAGTAAAGGTGCTAAGTTGACTTTAGGTACAACAACTGTTAGTGTTGATAAAACCTTCACAGTTAATGGACAGGTTCAGCCTAATGATTGGGGTAACTTTGATGCAAGATTCTTTACACAGAGTGCTGCTGATTTGAGATTTGCAAGACTTGCTGCAAACAATACCATGACAGGTTCTAACATCTTCACAAACTATCAGACAATTACTGCTGATGGTGCATTACTAAGATTGAAGCCAAGTACGACAAATGGTGCTGTCTTTATGCAAGCATACAATGGTTCTGGTGCAGAAGCTTGGTATCTTGGTCAGCCAGATGGAACTAAGCAGGACATTAACTTGTTTAACCAGATGACAAGTGCTGCTATGAGAATCTCTACAGAGTTCTTCTTCAGCAAGGCTTTGAATGTTACTGGTCAGGTTAAGCCATCTGATTTTACAAACTTTGACTCAAGATATGTTCCAAGTTCTTTGACAAACGTTCTTGCAAGAACTAACGCTGCCAATACTTTCAATGGATATCAAACATTCTTGTCCGATGAAACACCAATTGTTTTGAAGAATGTAACTTTGAATGCTCCTTTATATATTGCAAGTATGAATGCTAATAATGTTAGAAGGTGGTATATTGGTAATGGTAGCCAAAATAATCCAGAAACACTATTCATTGCTAATGACACAACTGGTGCAGCTATCACACTTAATAACACTGTTAACATTACTAAAACAGTTGGTATTACTGGTCAGGTACAACCAACTGACCTGTCAAACTTTGATTCAAGGTACTTTGTTAAAACAAAACTGCTAACTCAGTCACTCATGACTCGTTCTGCAAATAACGTATCCGAACCTACTGCTGTGAGTCTGGCTTACTCTGGTTTTATTAGAAATAATGGTGTATCGGTTGCCTTGCAAGATTTAGCAATTCACGTTGGACACCCAGAAAGGTCTGATGCTGGTCACTCTAGAGGTATCTCTTTCCAATATGGCTCTAAGGGTTTAGCGGCTTGGACTTATGCTTTTGGTGCTGATGGTAGTTTTGCTGGTGAAGCTCAGTTGTATACAACAGCTTTCAAACCAACTCCATCGGATATTGGAGCTTACACTAAAGCAGAAACTGACCAGAAGATTGCAACAGCAATTACTAACTCTACAGACCTTAACAAAATCTATCCAGTTGGTATGGTAACGTTCTTTGCATCGAATGTAAACCCTAACACAACCTTTGCAGGAACTACTTGGACTTACTTATCAAATGGTAATCAAAGGACTATTAGGATTGCAAACCCGAATGGTAGTGATGTTGGTGCAGTTGGTGGTTCAGACTCTAAGAGTATTGCTGTAGGGCATCTTCCAAGCCACACACACAGCTTCTCTGCGACTACCTCTTCATTTGACTATGGTACAAAGGGAACGAACGTTGCAGGTTGGCATGGACACACTGTATCTGGCTCAACTGCTGGTGCTGGTTCTCACTCTCATAACGTTGCAGTTCGTTATCTGAACACTTCTCAACAGTATGCCTATGTAGGTGCTGCTGGTCAGTGGGCTGGTGTAGCTGGTAACCAAGCTACCGAGGCAGTTGGTAACCACACTCACACTTTCTCTGGTAGTGCTGCTGGTGATGGTAACCACTCCCACACTGTAGCAATTGGTGCTCACTCACATACAGTAAGTGGGACAACTGGTGGTACAGGTTCTGGTTCAGCGTTTGATGTTACTAACGCTTTCATCAAATTAATGGCTTGGGTAAGAACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
11f454033079e9b21be66a7d3e5a362b9fe6588822be7e58224a703c746d0d93
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6743
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Citrobacter freundii Myophage Michonne Bernal,C.L., Berkowitz,V.E., Cahill,J.L., Rasche,E.S. and Kuty Everett,G.F. 2015 26430047 GenBank