Protein

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Genbank accession
QOI66722.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MSNLEKSVNINLENTAHYGNISNLDITFRTGENDSSVLLFNITKNNQPLFLSEENIKARIAIRGKGVMVVAPLEILDPFKGVLKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRITDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKSKITKDDGKITQITGFDFNNPEQRVGDSTQFIYVSQAINYPRGVSTNGIVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSDWSELALNDYNTPFETVQNAQSKANTAESNAKLYTDDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGNPFGGGKISLNPSNLPDNDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSQRGSGANANRGTINKIIGVRK
Physico‐chemical
properties
protein length:488 AA
molecular weight: 54171,82570 Da
isoelectric point:5,59457
aromaticity:0,09426
hydropathy:-0,50307

Domains

Domains [InterPro]
IPR018913
ATT
6–152
IPR018913 DC_0143 cd19958 DC_0151
G3DSA:2.60.40.3350
ATT
6–130
G3DSA:2.60.40.3350 Coil IPR060153 Coil
QOI66722.1
1 488
Architecture
ATT
STR
ATT
RBD
ATT 6-152 | STR 153-247 | ATT 248-337 | RBD 338-488
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage JD419
[NCBI] 		2776725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66722.1 [NCBI]
Genbank nucleotide accession
MT899504 [NCBI]
CDS location
range 34047 -> 35513
strand -
CDS
ATGAGTAATTTAGAGAAATCTGTAAATATTAATTTAGAGAACACTGCGCATTATGGAAATATTTCAAATCTAGATATAACTTTTAGAACAGGAGAGAATGATTCTTCTGTTCTTCTTTTTAATATCACTAAAAATAATCAACCGTTATTCCTGAGTGAAGAAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTTATGGTGGTTGCTCCACTAGAAATATTAGATCCATTTAAAGGCGTATTAAAATTTCAATTACCTAACGATGTAATTAAACGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATTAGGGAATTCAGACGTGGTAGTTGTCGAGAGAACTATCACATTTAACGTTGAAAAAAGCTTGTTTAGCATGATTCCATCTGAAACAAAATTACACTATATTGTTGAATTTCAGGAATTAGAAAAAACTATTATGGATCGTGCGAAAGCAATGGACGAGGCTATAAAAAATGGTGAAGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGGCTATCAGATATTCAAATAGCAAAATCGTCAAGTATAGATGAATTAAAGCAACTCGCTAATAGCCGTATAACCGATTTGGAGAATAAAGCGCAAGCTTATTCAAGAACATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAGGCTTTCAAGCAGTCAGTGAATAGCGGCGGTTTAGTCACAAGTGGTTCAACTTCAAATTGGCAAAAATCTAAGATTACTAAAGACGACGGTAAAATAACACAGATTACTGGATTTGATTTTAATAATCCAGAACAAAGAGTAGGAGATTCAACCCAATTTATTTACGTCTCACAAGCCATAAATTATCCAAGAGGCGTAAGCACTAATGGTATTGTCGAATATTTAGTAGTAACTTCCGACTACAAACGTATGACATATCGTCCAAATGGTACAAATAAAGTATTTGTTAAGAGAAAAGAAGCAGGTTCTTGGTCTGATTGGTCAGAATTAGCCCTTAATGATTACAATACGCCTTTTGAAACTGTTCAAAACGCGCAATCAAAAGCTAATACGGCTGAAAGCAACGCCAAACTATACACAGATGACAAGTTTAATAAAAGATATTCAGTTATTTTTGATGGGACGGCAAATGGCGTTGGCTCAACATTATATCTTAATGAAAGTTTAGATCAATTTATTTTGTTAATTTTTTATGGAACTTTTCCAGGGGGAGATTTTACTGAGTTTGGCAACCCCTTTGGTGGCGGGAAAATTTCATTGAACCCATCAAATTTACCGGATAATGACGGTAACGGTGGAGGCGTTTATGAGTTTGGGTTAACTAAATCTAGTCGTACATCTTTAACAATATCGAACGATGTTTATTTCGACTTAGGAAGTCAAAGAGGTTCTGGTGCCAATGCAAATAGAGGAACAATCAACAAAATTATAGGAGTGAGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9b9121b9977bbdbc43daba67f3bcfd29f8b580a1e4491d5593711809d803dde
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8266
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of bacteriophage JD419, a Staphylococcal phage with an unusual morphology and broad host range Feng,T., Leptihn,S., Dong,K., Loh,B., Zhang,Y., Li,M., Guo,X. and Cui,Z. 2020 — GenBank