Protein

View in Explore
Genbank accession
WQZ00372.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,68
Protein sequence
MPLITQSIKNLKGGISQQPDILRFSDQGETQVNCWSSESDGLQKRPPTVFKRRLNIDVGSDPKFHLINRDEQEQYYIVFNGSDIQVVDLSGNQYSVSGAVDYVKSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKARALINLRGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVASYPAFTFDLGSGFLLITAPSGTDINSVETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVRQSDGSFEFKTLDWSKRGAGNDGTNPMPSFVDATINDVFFYRNRLGFLSGENVIMSRSASYFAFFPKSVATLSDDDPIDVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKRYFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDGVQLQASWSHWEFPKADKILASASIGSTMLIVRQHQGGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIGSYNADTHKTTVDIGAAYGGNAPSPGRYYLIDSQGAYVDLGDLTSISTVVILNGDWSGRTVFIGRAYLMSYKFSRFLIKIEDDSGTQSEDTGRLQLRRAWVNYKDTGALRLIVRNGEREFVNTFNGYTLGQQTIGTTNIGDGQYRFAMNGNALTTSLTLESDYPTPVSIVGCGWEASYAKKARSV
Physico‐chemical
properties
protein length:785 AA
molecular weight: 86168,52380 Da
isoelectric point:5,69410
aromaticity:0,10446
hydropathy:-0,25350

Domains

Domains [InterPro]
IPR058003
TTP
1–784
IPR058003
WQZ00372.1
1 785
Architecture
TTP
TTP 1-784 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQZ00372.1
1 785
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9680
Central domain 135 333 200 0,1003
C-terminal 334 785 451 0,1595
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-333
C-terminal
334-785

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Vb_SalP_792
[NCBI] 		3110515 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ00372.1 [NCBI]
Genbank nucleotide accession
OR978128 [NCBI]
CDS location
range 25410 -> 27767
strand +
CDS
ATGCCGCTTATCACACAAAGCATAAAAAATCTTAAAGGTGGCATTAGCCAGCAGCCTGATATACTGAGGTTCTCAGACCAAGGCGAGACACAGGTTAACTGCTGGTCATCCGAGAGTGATGGCCTACAGAAGCGCCCACCTACAGTCTTCAAGCGACGACTTAACATCGACGTTGGGAGCGACCCTAAGTTCCACCTGATTAACCGTGACGAGCAGGAGCAGTATTACATCGTGTTCAATGGGTCTGACATTCAGGTAGTTGACTTGAGTGGTAATCAATACTCAGTGTCCGGCGCGGTAGACTACGTTAAGTCCTCCAACCCACGAGATGACATCCGTGTCGTTACCGTGGCAGACTATACGTTCGTCGTGAACCGTAAGGTTGTAGTCAAAGGTGGAAGCGAGAAGTCACACTCTGGTTACAACCGCAAAGCACGAGCTTTAATTAACCTGCGTGGTGGACAGTATGGTCGAACCCTTAAGGTAGGAATCAATGGAGGCGTTAAGGTTTCGCATAAGTTGCCAGCAGGTAATGATGCCGAGAATGACCCTCCTAAGGTTGATGCTCAGGCTATCGGTGCGGCTCTGAGAGACCTTCTTGTTGCTTCTTACCCTGCCTTCACGTTCGACCTTGGGTCTGGCTTCCTGTTAATCACTGCCCCCTCAGGGACTGACATTAACTCAGTGGAGACGGAGGATGGCTACGCTAACCAGCTAATAAGCCCAGTCCTAGACACTGTGCAGACAATCTCTAAACTACCTCTTGCCGCCCCTAATGGGTATATCATTAAGATTCAAGGCGAGACAAACAGTAGCGCCGATGAATACTACGTGATGTATGACTCCAACACTAAGACGTGGAAGGAGACAGTGGAGCCGGGAGTTGTCACTGGGTTCGATAACACCACAATGCCGCACGCTCTGGTACGACAATCTGATGGCTCCTTTGAGTTCAAGACTCTGGACTGGTCTAAGCGTGGTGCTGGTAATGATGGCACAAACCCTATGCCTAGCTTCGTGGATGCTACGATTAACGATGTGTTCTTCTACAGGAACAGGCTAGGGTTCTTGTCAGGAGAGAACGTAATCATGAGCCGTTCAGCCAGCTACTTTGCGTTCTTCCCTAAGAGTGTGGCGACACTGAGTGACGATGACCCTATTGACGTAGCTGTAAGTCACCCTCGAATCTCAATCCTTAAGTATGCCGTTCCGTTTAGCGAGCAGCTACTACTTTGGTCGGATGAGGTTCAGTTCGTGATGACAAGCTCTGGGGTCCTTACCTCGAAGTCTATCCAGCTTGATGTAGGCTCAGAGTTTGCCCTAGGCGATAATGCCAGACCGTTCGCTGTAGGACGCTCAGTATTCTTCTCAGCGCCTCGTGGGTCATTCACCAGCATTAAGCGATACTTCGCTGTAGCCGATGTGTCTGATGTTAAGGATGCCGATGATACAACTGGTCACGTACTGTCCTACATCCCTAACGGGGTGTTTGATATTCAAGGTACAGGGACTGAGAACTACATCTGCGTCAACTCTACAGGCGCATACAACCGAATCTACATCTACAAGTTCTTGTTTAAGGATGGCGTACAGCTTCAAGCCTCTTGGTCACACTGGGAGTTCCCTAAAGCTGATAAGATTCTGGCGTCTGCGTCGATTGGCTCTACCATGTTAATCGTGCGTCAGCACCAAGGAGGTGTGGACATTGAGCACCTTAAGTTCATCAAGGAGGCCACTGACTTCCCGTCAGAGCCGTATAGACTACACGTTGACTCAAAGGTGTCTATGGTCATCCCAATTGGCTCATATAATGCTGACACCCATAAGACTACGGTTGACATTGGTGCTGCTTATGGTGGCAACGCTCCGTCTCCCGGTCGGTACTATCTGATTGACAGCCAGGGTGCTTATGTGGACCTTGGGGACTTGACCAGTATCTCTACTGTGGTTATCCTCAACGGCGATTGGTCAGGACGTACAGTGTTCATCGGAAGGGCTTATCTGATGTCCTACAAGTTCTCACGGTTCCTGATTAAGATTGAAGACGATAGTGGAACCCAGTCTGAAGACACTGGTCGTCTACAGCTTCGTCGGGCTTGGGTCAACTACAAGGACACTGGCGCTCTTAGACTCATTGTCAGAAACGGTGAGCGGGAGTTCGTGAACACCTTTAATGGGTACACCCTTGGTCAGCAAACCATCGGGACTACCAACATTGGGGATGGTCAGTATCGCTTCGCTATGAATGGTAACGCATTAACCACGAGTCTAACCTTAGAGTCAGATTATCCTACCCCAGTGTCCATCGTTGGCTGTGGCTGGGAGGCGTCATACGCTAAGAAAGCTCGTTCCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
411819fe401b22ebf507aefc3a5da3883d2c1ab9ea7e311d98e584df7a8d0c69
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of Salmonella phage Juliet,R., Loganathan,A., Manohar,P., Neeravi,A., Bakthavatchalam,Y.D., Veeraraghavan,B. and Nachimuthu,R. 2024-06-03 — GenBank