Protein

View in Explore
Genbank accession
YP_001718729.1 [GenBank]
Protein name
P2 gpH-like protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MSAKFYTLLTEIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPSAQQTALVAEKRRAALNMLYIDPQNSSQIIAEQVIPETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKALELKVYVDDLMAKHLAAPDPHSQYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAMVDSAPAALDTLNELAAALGNDPNFATTMINALAGKQPLDNTLTNLSGKDIAGLLTYLGLGETAKQAAGAVQKTGDEMSGKLTLPQTSSFGVNTNNTLGGSSIAIGDNDTGFKQNGDGILDTFANSQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDAQGENIDGINYAPLQKRVGNQWYTVQGGTA
Physico‐chemical
properties
protein length:524 AA
molecular weight: 55304,37890 Da
isoelectric point:4,91216
aromaticity:0,06489
hydropathy:-0,17118

Domains

Domains [InterPro]
IPR051934
Unmapped
1–523
IPR051934
IPR022225
ATT
1–150
IPR022225 G3DSA:6.20.70.20
DC_1172
STR
1–524
DC_1172
YP_001718729.1
1 524
Architecture
ATT
STR
ATT 1-150 | STR 151-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Felsduovirus Fels2
[NCBI] 		194701 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
[NCBI] 		99287 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001718729.1 [NCBI]
Genbank nucleotide accession
NC_010463.1 [NCBI]
CDS location
range 9707 -> 11281
strand -
CDS
ATGAGCGCAAAATTTTATACCCTGCTGACGGAGATCGGCGCGGCGAAACTGGCAAGCGCCGCCGCGCTCGGTGTCCCGCTGAAAATTACCCATATGGCGGTGGGCGACGGTGGCGGTGTGCTGCCCACACCCAGCGCGCAACAGACCGCGTTAGTTGCTGAGAAGCGTCGAGCAGCGCTGAATATGCTGTATATCGACCCGCAGAACAGCAGCCAGATTATTGCTGAGCAAGTGATCCCGGAAACTGAGGGGGGATGGTGGATTCGTGAGGTCGGCCTGTTTGATGAAACCGGCGCACTGATCGCCGTGGGTAACTGCCCTGAGAGCTACAAGCCGCAGCTGACAGAAGGGAGCGGACGTACGCAGACCGTGCGCATGGTACTGATTACCAGTAGCACCGATAACATCACCCTGAAAATTGACCCTGCAGTAGTGCTGGCAACCCGTAAATATGTAGATGATAAGGCGCTGGAGCTGAAGGTATATGTAGACGACCTGATGGCAAAGCATCTTGCTGCGCCGGACCCGCATTCACAGTATGCGCAGAAGGACAGCCCGACACTCACAGGGATTCCAAAGGTACCGACGCCAGCGGCGGGTAACAGCACTAAACAGATTGCGAACACGGAATTTGTGGCATCGTCTATTGCGGCAATGGTGGATTCTGCGCCTGCAGCACTGGATACGCTGAACGAGCTGGCAGCGGCTCTGGGGAATGACCCGAACTTTGCCACGACGATGATAAACGCTCTGGCTGGAAAGCAACCGCTGGACAATACACTGACGAATTTAAGCGGAAAAGATATCGCCGGCCTTCTCACATACCTCGGTTTAGGCGAAACAGCAAAGCAAGCTGCGGGCGCAGTCCAGAAAACTGGCGATGAGATGAGCGGGAAGTTAACCCTGCCACAGACATCTTCCTTCGGCGTGAATACTAATAACACACTGGGCGGTAGTTCCATCGCTATTGGTGATAACGATACCGGCTTTAAACAGAATGGTGACGGGATACTGGATACGTTTGCGAATAGCCAGCACACCGTTCGTGTCGCTCCCGGTGAAATGATGGTTCTGGGAGCTATTCGCGCAGGCAAAGAAAAAAAACTGTCACTGACGAGTAATAATAATTCGACAATGACAGCCACGTTTAATTTATGGGGCGACGCAAACAGGCCTACAGTGATTGAACTGGACGACGACCAGGGATGGCATTTATACAGCCAGCGAAATCCTGATGGTTCGATTGTCTTTACGGTCAATGGCGATATCACCGCTAACACGCTTCGTGCAGGCGGGGCCATCTATCAGAATAACGGCGACATCTTTGGTTCTGTCTGGGGGAATAGCTGGCTGAGTCTGTGGATTAATAATAATTTCGTCGCAGATGTTCAGTTAGGGGCTGGCACATCAGTGACTACCTGGAACAATGCAGGTTCCTGGCCTAACACTCCCGGATATGTAGTTACCTCCGTCTGGAAAGATGCACAAGGCGAAAATATTGATGGTATTAATTATGCGCCTTTGCAAAAACGAGTCGGGAATCAGTGGTATACCGTACAAGGGGGAACGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6226d4a0bd78badacfd428501675570fe9d57ecb7d3c8a222a40eac88ce7661
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Refined annotation of the phage genomes integrated into the Salmonella typhimurium LT2 genome Lingohr,E.J., Villegas,A. and Kropinski,A.M. 2011-05-19 — GenBank