Protein

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Genbank accession
CAB4163289.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MSQPPDPYQRQYNFTDHSIQLPNAPQPGNKLDLELNEVRESLNHTISRLNEIQRDDGKLRDSAVPDDHLIPGPVGPMGPQGIQGIQGVPGVPGINGIDGQQGIQGIQGIQGPVGPQGPQGDKYACTSTTSLALSNGTKTFTTQTGLAWTSQQDVTIVYDAAHHMHGTVTTYDAQTGAMVVNVSQHTGNGGPYSTWTINIEGAIGAQGPVGPAGQQGEPGIQGPQGIQGPAGPGLVDGLTISAAAATYKTIAAADAALAGKAALTHTHQIADVSGLSSALSGKASSVHSHAMADVSGLTGTISSMSLDINSRLKKVTDASFSMLYNAGYLSIPAGSDLFGQRAQYTVPLQALGTRSWMVQRPEFLGKWIFKNVMNAENKRQTKGPRSFVEFTHTDFGIIAHGDLEHEDAGIVIDSQCDWIELTDAAGTPWAGYYSPRQTVTDGSGGYNSVTGSPGGGSCWLPNGYVISLGETVPLSFQWSDSENHTGNFQYGYTEYGMVIANGAGGTTITSQNTVITASAGQVFHSDPGQCSGSLDLAFDGVNYYTTSDTRQSAPAAGTYIRSDSGVLQVSLCGSFYQVGSWSGDFYTDGTCTGETFSGTTEYVPYGTYLTNCDGYNHYSNGSGGYYSESDGTGGCSGTTGNTSSGDLYVYISEISASVVGGSYSATEYYNYDCTTYWSGGDSWYSYGTLLASDGSNDYFSNGSGGYYVQGTYNPPSCTEGGYVGTTSGDLYVNINGNDYTAGSYTAEVYTYADCSTYTMNTQNSWWSYGTQIYSDGTTTYYSDGTGSYYT
Physico‐chemical
properties
protein length:790 AA
molecular weight: 83197,30600 Da
isoelectric point:4,42255
aromaticity:0,10759
hydropathy:-0,39506

Domains

Domains [InterPro]
DC_0862
STR
1–75
DC_0862 DC_1245
Coil
Unmapped
35–55
Coil PTHR24637 PF12789
IPR008160
STR
71–121
IPR008160 G3DSA:1.20.5.320
G3DSA:1.20.5.320
STR
93–145
G3DSA:1.20.5.320
CAB4163289.1
1 790
Architecture
STR
STR 1-335 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4163289.1 [NCBI]
Genbank nucleotide accession
LR796757 [NCBI]
CDS location
range 3202 -> 5574
strand +
CDS
ATGTCCCAGCCGCCCGATCCCTATCAGCGCCAATACAATTTTACGGATCACTCTATCCAGCTGCCGAACGCGCCGCAGCCGGGCAACAAGCTCGACCTTGAGCTCAACGAAGTCCGCGAGAGCTTGAACCATACGATCTCGCGCCTCAACGAGATCCAGCGCGACGACGGAAAGCTGCGCGACTCTGCTGTTCCGGACGATCATCTGATCCCCGGTCCGGTCGGGCCAATGGGCCCCCAGGGGATCCAAGGAATTCAAGGCGTGCCTGGCGTGCCGGGCATTAACGGAATTGACGGCCAGCAGGGCATCCAAGGGATCCAAGGGATCCAAGGCCCCGTCGGCCCCCAAGGCCCCCAAGGCGATAAATACGCATGCACGTCAACGACCAGCCTAGCGCTGTCGAACGGCACCAAGACATTCACGACGCAGACCGGCCTGGCGTGGACGAGCCAGCAGGATGTGACGATCGTCTACGACGCTGCGCATCACATGCACGGAACGGTGACCACTTACGACGCGCAGACCGGCGCGATGGTCGTCAATGTTTCGCAGCACACCGGCAACGGTGGCCCTTACAGCACCTGGACGATCAACATCGAAGGCGCGATCGGCGCGCAAGGCCCCGTCGGCCCAGCCGGCCAGCAAGGTGAGCCGGGGATCCAAGGCCCCCAGGGGATCCAAGGCCCGGCAGGACCTGGTTTGGTTGACGGACTCACGATCTCCGCAGCCGCTGCGACGTATAAGACGATCGCCGCAGCTGACGCTGCGCTCGCCGGCAAGGCTGCGCTCACGCACACGCACCAGATCGCGGACGTTTCCGGTCTTTCGAGCGCGCTTTCCGGTAAAGCCAGCAGCGTTCACTCTCATGCGATGGCCGATGTGTCCGGTTTGACCGGCACGATCAGCAGCATGTCCCTGGACATTAACTCCAGGCTCAAAAAAGTGACCGATGCGTCGTTCTCGATGCTCTACAACGCCGGTTATCTGTCGATCCCGGCCGGTTCTGATCTGTTCGGGCAGCGAGCTCAATACACGGTGCCGCTGCAAGCGCTAGGAACGCGCTCCTGGATGGTCCAGCGCCCGGAGTTCCTGGGCAAATGGATCTTCAAGAACGTGATGAACGCGGAAAACAAGCGCCAGACCAAGGGCCCGCGCTCGTTCGTCGAGTTCACGCACACCGATTTCGGTATTATCGCGCACGGCGACCTGGAACATGAGGACGCCGGCATCGTTATCGACAGCCAATGCGATTGGATCGAGCTTACGGACGCAGCCGGGACGCCCTGGGCCGGTTATTACAGCCCCAGGCAGACGGTTACGGACGGATCCGGCGGTTATAACAGCGTTACCGGATCTCCTGGTGGAGGCAGCTGTTGGCTCCCTAACGGATACGTCATTTCCCTGGGTGAGACTGTTCCTCTGTCTTTCCAATGGAGCGATAGCGAAAACCATACCGGCAATTTCCAATACGGATACACGGAATACGGCATGGTCATCGCGAATGGCGCCGGCGGCACCACCATTACCAGCCAGAACACGGTTATCACGGCTTCTGCCGGCCAGGTGTTCCACTCTGATCCTGGTCAATGCTCCGGATCCCTGGATCTCGCGTTCGACGGCGTCAATTACTACACGACCAGCGACACGCGCCAGAGCGCGCCCGCAGCCGGCACCTACATCCGCAGCGACTCCGGTGTTCTCCAGGTTTCGCTGTGCGGTTCGTTCTACCAGGTCGGCAGCTGGTCCGGTGATTTCTACACCGACGGCACATGCACCGGCGAGACGTTCAGCGGAACGACCGAATACGTCCCCTACGGCACCTATCTCACCAACTGCGACGGCTACAACCACTACAGCAACGGATCCGGCGGCTACTATTCCGAGAGCGACGGCACCGGTGGTTGCAGCGGAACGACCGGCAACACGTCGTCCGGCGATCTCTACGTCTATATCAGCGAGATCAGCGCGAGCGTCGTCGGCGGCAGCTATTCCGCGACGGAATACTACAACTACGATTGCACGACCTATTGGTCCGGCGGCGACAGCTGGTATAGCTACGGCACCCTCCTGGCAAGCGACGGATCGAATGACTACTTCTCCAACGGCTCCGGCGGTTACTACGTCCAGGGCACCTACAATCCTCCGTCTTGCACGGAAGGCGGTTATGTCGGAACGACCAGCGGCGATCTGTATGTGAACATCAACGGCAACGACTACACCGCCGGCTCTTACACGGCCGAGGTCTACACCTACGCCGATTGCAGCACCTACACGATGAACACGCAGAACAGCTGGTGGAGCTACGGCACCCAGATCTACTCCGACGGCACGACCACCTACTACTCCGACGGCACCGGTTCTTATTACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8beea34828ac91d2f34fb430b8a30bd705b1093e30171ec286203e2ba700a9b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50