Protein

View in Explore
Genbank accession
XOD33086.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MSCNDDKTYEPCSCGCGGSSDCNCDCSECAPVNCIEQAIRDALATLQEQLEALVKRAEDAAKASEDAAAASAASADEAKGYRDAAELAATTATDALKTITDVAVSLEETAKKLQEIADELATAIAGIAVVTWYYTAVSDGQTVIPVPEDKNTLEVQCIYIEGARQEPGRGFVFDKTAMTITLAEGIPLGMEISIILGTYSDNPTDFPHTLASNNGASLVGTTSGDTVQEVLNDINTDLAGLDRTVRSDLISSASGKGDELVRVKQPFSNSNPTTVHEKMRHIVTIQDGSTTGAEPDGVTDCTPSLLNLIATNCSVIRFPYIPGTANVYYFSAFDPDTVQNKILDVDPNVKLSVPTDWLAGKASAQYIGFTTDTRFVFRNLKTEYLASPYNNHTKAAKRTFLEEASFDRATTKAIIPSTDMFAQKIAWPNQDTWLADTFSSVNTLSASISASAGDDAFHMAFMDVTVGYEISSCILINSTPQLAAIVRSSGGFSGVFAQPTQTGASITQIYKEIGKTALTTTLDFPMLHDHPAYSPVNCEWKIRINSMNNYDILLNGFHLTTINAPGYIKDAGFGAYFNTGLSNPLVNVYQPVLTVNNRYTRNGFVTVKVFGDSISAPRVDCWPNFLKDELEFSEGLRNWRIINKAIPGDNTAGQLAIMQSEGVSDANIVVIAVGTNDGQGQTDLTAYKNNLTSMINICNTAGVTVILCKFGIWYTQTEAGSVRGQPSANAEKAFRYRNTVARVAAETGAKLVDLTAIEGPIAAYYINPNLYVNMVGAGDSFLHDNIRPTTTANCVIARAVARAIMGTLASTRTERSPGMLVVNAQNNWLINTGDRPARVSLSNNGMVSLGGIIFKSTGSVANGTLIATIPRNLAPIYTEQFMVYADTQGVNVQVTPLGEIFLYGATTATNFIGLSGLTWLRK
Physico‐chemical
properties
protein length:922 AA
molecular weight: 98897,18530 Da
isoelectric point:4,83122
aromaticity:0,07809
hydropathy:-0,05857

Domains

Domains [InterPro]
DC_0071
STR
29–195
DC_0071 IPR012334 IPR051532
Coil
Unmapped
36–67
Coil Coil IPR036514
SSF52266
STR
606–807
SSF52266
IPR036514
STR
606–807
IPR036514
IPR013830
ENZ
609–756
IPR013830 DC_1902
XOD33086.1
1 922
Architecture
STR
STR
STR
RBD
STR 29-195 | STR 237-518 | STR 605-807 | RBD 808-922
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD33086.1
1 922
Domain Start End Length (AA) Confidence
N-terminal 1 299 299 0,8986
Central domain 300 511 213 0,8088
C-terminal 512 922 410 0,6054
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-299
Central
300-511
C-terminal
512-922

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_Ecl_SABI
[NCBI] 		3391471 No lineage information
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD33086.1 [NCBI]
Genbank nucleotide accession
PQ864023.1 [NCBI]
CDS location
range 20667 -> 23435
strand +
CDS
ATGTCTTGCAATGATGATAAAACTTATGAGCCTTGCTCTTGCGGCTGTGGTGGTAGCTCCGATTGCAACTGTGATTGCAGTGAATGTGCTCCGGTTAACTGCATTGAGCAGGCTATCCGTGATGCCCTTGCAACTCTGCAAGAGCAACTCGAAGCACTGGTAAAGCGTGCAGAAGACGCTGCCAAAGCCAGCGAGGATGCAGCGGCTGCGTCAGCAGCCAGCGCAGACGAAGCGAAGGGCTATCGTGATGCAGCGGAACTTGCAGCAACTACTGCAACCGATGCACTGAAAACTATTACCGATGTAGCGGTATCACTTGAAGAAACAGCTAAAAAACTGCAAGAGATTGCCGATGAACTGGCAACTGCTATTGCAGGGATCGCTGTTGTTACGTGGTACTACACTGCTGTATCTGATGGTCAAACAGTCATTCCTGTACCGGAAGATAAAAATACTCTGGAAGTTCAATGTATTTATATCGAAGGTGCGCGTCAGGAACCAGGCCGTGGTTTTGTCTTTGACAAGACAGCTATGACTATTACTCTGGCTGAAGGTATTCCGTTGGGTATGGAGATCTCCATCATCCTGGGTACTTACTCGGATAACCCTACGGATTTCCCTCATACACTGGCTTCCAATAATGGGGCTAGTTTAGTTGGTACTACCTCCGGGGATACGGTTCAGGAAGTATTGAATGATATCAATACTGATTTGGCTGGTTTAGATCGTACTGTCCGTAGCGATTTAATTAGTTCTGCATCTGGTAAGGGTGATGAACTGGTACGGGTTAAACAACCGTTCAGTAATTCTAACCCTACTACTGTACACGAAAAGATGCGCCACATTGTAACCATTCAGGATGGTTCAACTACGGGTGCAGAACCGGATGGTGTGACCGATTGTACGCCTTCATTGCTGAATCTGATTGCAACTAACTGTTCAGTAATTCGCTTCCCATATATCCCTGGGACAGCCAATGTGTACTATTTCTCGGCTTTTGATCCTGATACTGTACAGAACAAAATCCTGGACGTAGATCCTAACGTTAAGCTATCAGTACCTACTGATTGGCTGGCCGGGAAAGCCTCTGCTCAGTACATCGGTTTCACTACGGATACTCGTTTTGTGTTCCGTAACCTTAAGACTGAATACCTGGCATCCCCATATAATAACCATACTAAGGCGGCTAAACGTACCTTCCTTGAGGAGGCTTCTTTTGACCGAGCAACTACTAAGGCTATCATTCCATCTACGGATATGTTTGCTCAGAAGATTGCATGGCCTAATCAGGATACCTGGCTTGCAGATACTTTTAGCAGTGTAAATACGCTGTCTGCTTCTATATCTGCCTCCGCTGGCGATGACGCATTCCATATGGCCTTTATGGATGTAACTGTTGGATACGAGATCTCCTCCTGTATCTTGATCAACAGTACCCCTCAGTTAGCGGCTATTGTGCGTTCTTCTGGTGGTTTCTCTGGGGTATTTGCTCAGCCAACCCAGACAGGTGCGTCCATTACCCAAATCTATAAAGAAATCGGTAAGACTGCCCTTACCACAACTCTGGATTTCCCAATGCTGCATGACCATCCGGCGTATTCACCGGTTAACTGTGAGTGGAAAATCCGTATTAACAGTATGAATAATTACGATATTTTGTTAAATGGTTTTCACTTAACAACTATCAATGCACCTGGCTACATCAAAGATGCCGGTTTCGGTGCTTATTTCAATACTGGTTTAAGCAACCCTTTAGTTAACGTTTACCAACCTGTGTTGACCGTTAACAACCGCTACACTCGAAATGGTTTTGTAACGGTTAAAGTGTTCGGGGATTCCATCTCAGCACCTCGTGTTGATTGCTGGCCTAACTTCCTTAAGGATGAACTTGAGTTCTCTGAAGGGTTACGTAACTGGCGCATTATCAACAAAGCTATTCCGGGTGATAATACTGCCGGGCAGCTTGCTATCATGCAGTCCGAAGGCGTGTCAGATGCCAATATTGTTGTTATCGCTGTAGGTACTAACGATGGGCAAGGGCAGACCGATTTAACGGCGTACAAAAATAACCTTACAAGCATGATTAATATCTGTAACACGGCTGGTGTTACTGTGATTCTGTGTAAGTTTGGTATTTGGTACACCCAGACCGAGGCCGGATCTGTTCGTGGTCAGCCATCAGCTAATGCTGAAAAGGCATTCCGCTATCGTAACACTGTTGCTCGTGTTGCTGCGGAAACCGGAGCCAAACTGGTAGACCTTACGGCTATTGAAGGCCCGATTGCAGCCTACTACATTAACCCGAATCTGTACGTTAACATGGTGGGCGCAGGGGATAGCTTCCTGCACGATAACATCCGCCCTACCACTACAGCTAACTGTGTTATCGCTCGTGCTGTAGCCAGAGCTATTATGGGTACTCTGGCTTCTACCCGTACTGAGCGTAGCCCTGGTATGCTTGTGGTAAACGCACAGAATAACTGGTTGATTAACACTGGGGATCGCCCTGCTCGTGTTAGCTTAAGCAACAATGGTATGGTGTCGTTAGGTGGTATTATTTTTAAAAGTACGGGTAGTGTTGCAAACGGTACACTTATTGCAACTATTCCTCGTAACCTCGCACCTATCTATACAGAGCAGTTTATGGTGTATGCAGATACCCAAGGGGTAAACGTGCAAGTTACACCGTTAGGGGAAATCTTCCTGTACGGTGCAACTACTGCAACTAACTTTATTGGCCTATCTGGACTAACGTGGTTGCGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1144dad5644930835206198afcd50a66efbf44a41e7250c3e7e0f0d156ca0502
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3285
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of bacteriophage against Enterobacter cloacae Moturi,A. 2024 — GenBank