Protein

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Genbank accession
XUU32800.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQNSGFIPMPNWPADTFAKRMKSFKNFMIALNVTQNSVEMPQMVWWSTSADAGGIPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLFIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVIADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVWGEGSYNPAKSSMIFSSFQDKKLFLFGNNSTFSGQNFVSTLERSDIYLGDDRMMKTVSAIIPHITGNGTCNIWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFSSEGDWYFNGYTIEMAPKAGMR
Physico‐chemical
properties
protein length:388 AA
molecular weight: 43841,65380 Da
isoelectric point:5,38819
aromaticity:0,13660
hydropathy:-0,39820

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUU32800.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 246 246 0,7149
Central domain 247 377 132 0,1163
C-terminal 378 388 10 0,9935
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-246
Central
247-377
C-terminal
378-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_1KM
[NCBI] 		3423641 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32800.1 [NCBI]
Genbank nucleotide accession
PV615265 [NCBI]
CDS location
range 19092 -> 20258
strand +
CDS
ATGCCCCAGAATAGTGGGTTTATTCCCATGCCTAACTGGCCGGCTGACACGTTCGCTAAACGAATGAAATCGTTCAAGAACTTTATGATTGCCTTGAACGTGACCCAGAACTCTGTAGAAATGCCACAGATGGTCTGGTGGAGTACCTCGGCTGATGCTGGGGGTATTCCTGCATCTTGGGACCCAACGGACCCTACTAAGGATGCTGGTCAGAACACCTTGGCTGATACCAATGGTGCCATCGTAGATGGTGTTAAGCTTCGTGACTCCTTCATCATCTACAAGGAAGACTCTGTATACTCCATGCGGTATATCGGTGGATTGTTCATCTTCCAATTCCAGCAGCTGTTTAACGACGTAGGTATCCTCGGACCCAACTGTGCAATAGAGTTCGATGGTAACCACTTTGTAGTAGGCCACGGTGACGTATATGTCCACAACGGTGTGCAGAAGCAGTCTGTTATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATTAACCCTGACAACTATCAACGGACCTTCGTAATTGCAGACCACGTGAATACTGAAATGTGGGTATGCTACTCTTCTACTAGGTCTGAGCCAGGTAAGCACTGCGACAGGGCTATCATCTGGAACTGGAAGGAAAACACTTGGAGTATCCGAGACCTCCCCAATGTTCTCAGTGGAGCCTACGGGATCATCGACCCCAAGACTTCTAACCTTTGGGATGATGACTCCAACCCCTGGGATACCGATACTTCGGTCTGGGGTGAAGGGTCTTATAACCCAGCCAAGTCCAGTATGATCTTCTCGTCTTTCCAGGATAAGAAGCTGTTCCTCTTTGGTAACAACTCTACTTTCTCTGGACAGAACTTCGTGAGTACCCTTGAGAGATCCGATATCTATCTCGGGGATGATCGAATGATGAAGACAGTGAGTGCCATCATTCCACACATTACTGGTAACGGTACTTGTAACATCTGGGTGGGTAATGCTCAGGTACAAGGTTCTGGTATTCGGTGGAAGGGCCCTTACCCATACCGGATTGGTCAGGACTATAAGATTGACACTAAACATGTGGGCCGGTATATAGCCTTGAAGTTCGACTTCTCCTCGGAGGGTGACTGGTACTTCAATGGATACACTATTGAAATGGCCCCGAAGGCAGGTATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d91f850900d02d5c3dcb4a3ca44cadb40a2649897832b18d792d8a7fc7ef7e2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50