Protein

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Genbank accession
AUR82840.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MKTHKTIKVSGEWQSLNSLSGAEVGAEIDVQVIQGRDVRFINSESRPSFESKGFGYSPREFFKSDAGEYECWVVSRLDIDESIIEAKCVGKAPVVDYQNVVVIGASIMNSAFGQDLINSVDDATAYLNVEGVNVYGYCFSGYAINQIIPKIQEAFVAFPSNTLFLIHIGGNNVSSLRPYASASQANIGSFEADFDLLESTIAPRYNDCVVADLTFRNYDGDTLYNQENGSLPLITNHYSPRRNPNFTNVDGRSVLDLYTYVRNNHAVMLSNDYIHLTGMGQTMIMQHMMDRTRYLVTGGAMPEPLADEVPPYVEPEQGASDSIIVDFGSVTGDEFSGVSVGVAEFKTGSVVPLFDVSGNPTSYSLEFTVTDSSDVDKDVSETQNGVNLGGVFANTLMSNPIHKSCLWWSPSDKVHIKVLGLSPLESIEIGFVATRAHSNDRFTEIIDSSNVANKASYATSNAIPDQPAKLVLTENGSGFAEFQVDAQSGTSYTYLSGIQISPLQ
Physico‐chemical
properties
protein length:504 AA
molecular weight: 54914,45600 Da
isoelectric point:4,52054
aromaticity:0,09722
hydropathy:-0,15159

Domains

Domains [InterPro]
SSF52266
STR
76–290
SSF52266
IPR036514
STR
89–290
IPR036514
AUR82840.1
1 504
Architecture
STR
STR 76-290 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82840.1
1 504
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,3527
Central domain 167 365 200 0,1980
C-terminal 366 504 138 0,9740
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-365
C-terminal
366-504

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.029.O._10N.261.55.A7
[NCBI] 		1881381 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82840.1 [NCBI]
Genbank nucleotide accession
MG592413.1 [NCBI]
CDS location
range 3647 -> 5161
strand +
CDS
ATGAAAACTCACAAGACAATAAAAGTGTCGGGGGAGTGGCAATCCTTGAACTCTCTATCTGGTGCAGAAGTTGGGGCCGAGATAGATGTTCAAGTAATCCAAGGAAGGGATGTAAGATTTATAAACTCAGAAAGCAGGCCTTCATTTGAATCTAAGGGATTCGGATATAGCCCAAGAGAGTTTTTCAAGTCAGATGCTGGAGAATATGAGTGCTGGGTTGTTTCTAGGTTAGATATTGATGAGTCGATAATTGAGGCCAAGTGCGTTGGCAAAGCTCCGGTGGTTGACTATCAAAACGTCGTAGTTATAGGGGCGTCAATAATGAACTCAGCTTTCGGTCAAGACCTGATAAACTCGGTCGATGATGCGACCGCCTACCTCAACGTGGAGGGTGTAAATGTATATGGGTATTGCTTCTCAGGCTACGCGATCAATCAGATTATACCAAAGATACAAGAAGCCTTTGTAGCATTCCCAAGTAACACTCTTTTCTTAATCCATATCGGCGGCAATAATGTATCTTCTCTGCGCCCTTATGCAAGCGCAAGCCAAGCTAACATCGGCTCGTTTGAAGCTGATTTCGACCTGCTTGAATCTACTATAGCCCCAAGATATAACGATTGTGTTGTAGCGGATTTAACATTTAGAAATTACGATGGTGACACGCTATACAATCAAGAAAATGGTTCTCTTCCATTGATAACTAATCACTACTCACCGCGCCGCAATCCGAACTTTACCAATGTTGACGGGAGAAGCGTTCTAGATTTGTATACTTACGTTAGAAATAATCACGCGGTAATGCTAAGTAATGATTACATTCATCTCACAGGCATGGGCCAGACAATGATCATGCAACATATGATGGACCGAACTCGCTATCTAGTTACTGGTGGGGCTATGCCAGAACCATTGGCTGATGAAGTGCCGCCATATGTAGAACCAGAGCAAGGCGCATCTGATAGCATTATAGTGGACTTTGGTAGCGTAACGGGGGATGAGTTTAGCGGCGTTTCCGTTGGTGTTGCAGAATTTAAGACCGGTAGCGTTGTTCCTCTATTTGATGTTTCAGGCAACCCAACCTCCTACAGCTTGGAGTTCACGGTCACGGATTCTTCTGATGTAGATAAGGATGTATCTGAAACTCAAAACGGCGTGAACCTAGGAGGAGTGTTTGCGAATACATTAATGAGCAACCCTATTCACAAATCATGCTTGTGGTGGTCGCCTAGTGACAAGGTGCACATTAAAGTCCTTGGCCTATCACCCTTAGAATCCATTGAAATTGGCTTTGTGGCAACTCGCGCACATTCGAATGATCGTTTTACTGAGATTATTGATTCAAGCAATGTTGCAAATAAAGCCTCATACGCAACAAGCAACGCAATTCCAGATCAGCCAGCCAAATTGGTGCTTACAGAAAATGGAAGTGGGTTTGCGGAGTTCCAAGTTGACGCTCAATCTGGAACGTCATACACATACCTAAGTGGAATACAGATATCACCCTTACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dbee4563fcfd2a31cab1c1d67c84af75601e79e2c6d01f894f27fc107c948e8c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7722
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank