Protein

View in Explore
Genbank accession
QIN97119.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPNRDRKKLDLATSKKSKQKSAYSKPLVEEKQPVAEVEVAPQYEAPMLSEEADKIDGLVAGLKEEQEQPKSETKARPKLKLSGKKAAKKEEAKPDFLDMDKDGNTEEPMKKAVAEAKPKAAKKKAVKEEVLQTHEDRMLGVIDQQLATMAKLNKSDAPAPKSLTEQKIENLEGQVRDMRRMMLEMSGMQAQNTIVGGLGAGSPGSGEVNLLKLDDVKEGSFEKANDGQLILWSQEDQKFVSSSERGVDNFFSEGIGGYEFTGGFADREAGSTGSSDFGTFIGYTQAQADAGQWRRFGFSEAQQQANDVAYFPTDARPNRAFDQSKGLFGGMFMPSGVTELIDYGWQDTTGGTFSTGHPQAGDPFVGYSNEVNSGDFQYTAADGSFDFRECQAGDLLQLRFDFNVNVQIANTTLEIALIWQTRDENDEPTFTFALTGQPIFYGTGTVGRTFLNRPFLSAYFASTEDTNARALLAIRADNPIQVAPLSTLVTIQR
Physico‐chemical
properties
protein length:493 AA
molecular weight: 54091,73120 Da
isoelectric point:4,91625
aromaticity:0,08519
hydropathy:-0,61481

Domains

Domains [InterPro]
DC_2218
STR
49–484
DC_2218
Coil
Unmapped
161–181
Coil
QIN97119.1
1 493
Architecture
STR
STR 49-484 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN97119.1 [NCBI]
Genbank nucleotide accession
MT162467.2 [NCBI]
CDS location
range 467 -> 1948
strand -
CDS
ATGCCTAATAGAGACAGGAAAAAGTTGGACTTGGCGACTTCAAAGAAGTCTAAGCAGAAGAGTGCATATTCAAAGCCTCTGGTTGAAGAGAAGCAACCAGTTGCTGAGGTGGAAGTAGCCCCTCAATATGAAGCTCCTATGCTGTCCGAAGAAGCGGACAAGATTGACGGACTGGTCGCAGGTCTGAAAGAAGAACAAGAGCAGCCTAAGTCCGAAACTAAGGCACGTCCGAAACTGAAGCTTTCTGGTAAGAAAGCAGCCAAGAAGGAAGAGGCTAAGCCTGACTTCCTTGATATGGATAAGGACGGCAACACTGAAGAGCCTATGAAGAAGGCTGTTGCTGAAGCTAAACCAAAGGCTGCTAAGAAGAAAGCGGTCAAGGAAGAGGTCCTGCAGACCCACGAAGACCGTATGTTGGGTGTTATTGACCAGCAGCTCGCCACTATGGCTAAGCTGAACAAGTCTGACGCACCTGCACCTAAGTCTCTGACCGAGCAGAAGATCGAAAACCTGGAAGGTCAGGTTCGCGATATGCGCCGTATGATGCTGGAAATGTCCGGCATGCAAGCACAGAACACTATCGTTGGTGGTCTGGGTGCCGGTTCCCCTGGTTCGGGTGAAGTTAACCTGCTGAAACTGGACGACGTCAAGGAAGGTTCCTTTGAAAAGGCCAACGATGGTCAGTTGATTCTTTGGTCTCAAGAGGACCAGAAGTTCGTCTCATCCTCCGAACGTGGTGTTGATAACTTCTTCAGTGAAGGTATTGGTGGTTATGAATTTACTGGTGGTTTTGCTGACCGTGAAGCTGGATCCACTGGTTCTTCTGACTTCGGTACCTTTATTGGATACACTCAGGCACAGGCTGACGCCGGTCAATGGCGCCGCTTCGGTTTCTCTGAGGCACAACAGCAAGCCAACGACGTCGCTTACTTCCCCACCGACGCTCGTCCTAACCGAGCATTTGACCAGTCCAAGGGTCTATTTGGTGGTATGTTTATGCCTTCTGGTGTAACTGAACTGATCGACTACGGTTGGCAGGACACCACTGGTGGTACTTTCAGCACCGGTCACCCCCAAGCCGGTGACCCATTTGTTGGTTACAGCAATGAGGTAAATAGTGGTGACTTCCAGTACACCGCTGCTGACGGTTCCTTTGACTTCCGAGAGTGTCAAGCCGGTGACCTTCTCCAACTTCGTTTTGACTTTAACGTCAACGTACAGATCGCTAACACGACTCTGGAAATTGCTCTTATCTGGCAGACCCGTGACGAGAACGACGAACCTACGTTCACCTTTGCTCTGACTGGTCAACCTATTTTCTACGGTACTGGTACTGTCGGACGTACCTTCCTCAACCGTCCTTTCCTGTCCGCCTACTTCGCTTCTACCGAAGATACCAACGCACGAGCCCTTCTCGCTATCCGTGCTGACAACCCAATTCAGGTTGCACCTCTGTCCACCCTCGTCACCATCCAACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fde016e69367b95c2d174a31c266d64bdcd95b93cdef5f2ba5919acc0a68144c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank