Protein

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Genbank accession
YP_004958053.1 [GenBank]
Protein name
baseplate assembly protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MNVLECYGVGVVAMDKDVDTDEVQIHIKGLFPESDGEVTTTVETKNTSTLTPTGDTQSSSSLQSNTVPAKWMALNTNRVTAPDVRKGSKVVVYKFQGTSKYLWTYFGMDGTLRLETIIWAFSASPNVDENTPVTPENYYMLLLSTHQKKIQLLTGQGNGEPTSYAFELNTGEGKFSIVDGENNILSLNSMAHALSFINDEKSFINIEKKDITLSCEKNMLLKGKDKIDIQCTDLSLKADKSISMETQKTSLVSPEIYMKGNVTHEGNYNQLGNYTVQGNVGIQGAFSQFGGAGSVEGGWTIDNIRYLGHRHGGVQSGGSKTDTPSA
Physico‐chemical
properties
protein length:326 AA
molecular weight: 35527,38580 Da
isoelectric point:5,22137
aromaticity:0,07669
hydropathy:-0,40061

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004958053.1
1 326
Domain Start End Length (AA) Confidence
N-terminal 1 123 123 0,4894
Central domain 124 315 193 0,0543
C-terminal 316 326 10 0,9867
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-123
Central
124-315
C-terminal
316-326

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage OBP
[NCBI] 		1124849 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004958053.1 [NCBI]
Genbank nucleotide accession
NC_016571 [NCBI]
CDS location
range 141116 -> 142096
strand -
CDS
ATGAATGTGTTAGAATGCTACGGTGTCGGCGTTGTCGCTATGGACAAGGACGTTGACACTGATGAGGTACAAATCCATATCAAGGGTTTGTTCCCAGAATCCGATGGTGAAGTAACGACGACGGTAGAAACTAAAAATACCTCGACGCTGACACCTACAGGTGATACTCAATCCAGTAGTTCTTTACAGAGTAACACCGTACCTGCTAAATGGATGGCTTTAAACACTAACCGTGTAACAGCTCCGGATGTTCGTAAAGGTAGTAAGGTAGTCGTCTACAAGTTCCAAGGTACGAGCAAGTATTTATGGACTTACTTTGGTATGGATGGGACTCTGCGTCTTGAGACGATAATCTGGGCTTTCTCTGCGTCACCTAACGTAGATGAGAACACACCAGTTACACCTGAAAACTATTACATGCTTTTACTCTCCACTCACCAGAAGAAGATTCAGCTCTTAACTGGACAGGGGAATGGGGAGCCTACTTCATATGCATTCGAATTGAATACAGGTGAAGGGAAGTTCAGTATTGTGGATGGTGAGAATAATATCTTATCTCTGAACTCTATGGCGCATGCTTTAAGTTTCATTAATGATGAGAAGTCTTTCATTAATATTGAAAAGAAAGATATCACCCTTTCTTGTGAAAAGAATATGTTACTGAAGGGTAAAGATAAGATCGATATCCAATGTACTGATCTTAGCTTGAAAGCTGATAAGTCCATCAGCATGGAAACTCAGAAGACCTCTTTGGTTTCTCCTGAAATCTATATGAAGGGCAATGTTACTCACGAAGGGAACTATAACCAACTGGGTAACTACACCGTACAAGGTAACGTCGGTATTCAAGGAGCATTCAGTCAGTTTGGTGGAGCAGGTAGCGTTGAAGGTGGCTGGACCATTGACAACATTCGTTACCTCGGTCACCGACATGGTGGTGTTCAGTCTGGTGGTAGTAAAACAGATACCCCGTCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79e10f7736757d536d57e1825bae4ec4e8fb3eff07985ae88100ebc152ec98a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50