Protein

View in Explore
UniProt accession
A0A8S5PAM1 [UniProt]
Protein name
Tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKNYVAGAGGSKGSKQSNDKNTLFSIASLQVLDLISEGQIGGLVDGAKSIYFDDVPLQNQTGSFNYDNVYVKEARGTPYQDMMQGYENTVIPIEVGAEVKNGFPVVRSITETIADKVRCGITIPYLYRVDNGLKKTSIEFKFEIAINNDDFVDYGTQRVEGKTSSQYQRSYTFNLPQRDSKGKAPERWLIRLTKLSPEADDDYVAALSFTTMFLISETKLNYPNSAIIGISATAENLSSIPTRSYIVDGLILQVPSNYDKKSNTYNGIWDGTFKMEVTDNPAWILYGLLTNTRWGLGEFIKPEQINKAKLYEIGRYCDELVDDGLGKKEKRFSINTQVTERSEAYELINSITSVFRGMTYWAMGQANFTCDKPTEPSVLFTQANVVNGEFRYAGSSRNEHHSVALITWNDPDQNYKQVVEYVEDRELIEKWGVRQSELTLFGCTSRAQAIRAGKWILYTEQYESDMISFTVGLDAALVLPGDIIKIHDPYHAGRRLGGRLKSCTTTSAVLDAVTQLKSEANPKISIRMPDNTFVTRTLKISDDEPRAEVFWDEPLPELPVDYAIWIIEEENLVPQIARVVNIAQGEDKGTFNIDCISYNKGKYDLIEKGWEIQLPNTSEIDPYDVGKPNNLNISVSISKSATGIRTGNLELSWTAGKNNASWVVEYRTEDKDGNGDEWTSVEVNSPYYTISNAQNGLYHIKIYAKGVLGTLSTELETYYDAEDSLPSPDDIQDFTITKRSTYLQLDWTPVEGALGYEIRIGDSWDAGEAIITNFAGNSFVHYQDKAGIYYYHIRAINSDGSLSKHVTTTRLDLHAPITPENFQVVRSNERLELKWDSNPETDITFYEIREGINWTASTLVCQSKLNHATIPVGAQTRRKFWIKAVCMPGIYSESADWYEIGVTNDKDKNIIIEMHERGLGFSNHRVYMSDRGDDLVMDDDRKRSEYIIPVDLFKKHYAHNSFSTSVTTIACTGEDTTTWEDLTCDFEAPGAERAWNLEGDQDGIVAYKQIALEYPLGSSDIEGISLENTTDTLSGKQAISAQAHYEPARYALGMTMNLITSAQWQLVDMPEHFKFSFWFKAKDQGRNKCAEILMMQTQDGTGWYKIYYNTEEKTLNLACSDGKDISFETEFLADDYFCIAFYQTNVTRGFGYGILGKQVEFKTTPAFPQGQIKLLSVGNS
Physico‐chemical
properties
protein length:1180 AA
molecular weight: 132967,21310 Da
isoelectric point:4,87408
aromaticity:0,10847
hydropathy:-0,43847

Domains

Domains [InterPro]
DC_0463
STR
2–810
DC_0463
IPR053171
Unmapped
7–804
IPR053171
IPR055385
ATT
90–205
IPR055385 IPR032876 IPR003961 IPR013783
IPR036116
STR
641–709
IPR036116 DC_1500
A0A8S5PAM1
1 1180
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 2-89 | ATT 90-205 | STR 206-338 | ATT 339-501 | STR 502-814 | RBD 815-1103 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5PAM1
1 1180
Domain Start End Length (AA) Confidence
N-terminal 1 910 910 0,9063
Central domain 911 1109 200 0,6560
C-terminal 1110 1180 70 0,5213
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-910
Central
911-1109
C-terminal
1110-1180

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctmpG14
[NCBI] 		2825654 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE04118.1 [NCBI]
Genbank nucleotide accession
BK015384 [NCBI]
CDS location
range 72157 -> 75699
strand +
CDS
ATGAAGAATTATGTAGCTGGTGCTGGTGGTAGTAAAGGTAGCAAACAGTCAAACGACAAGAACACTCTTTTCTCGATTGCCTCGCTTCAAGTCTTGGACTTAATCTCCGAAGGTCAGATCGGAGGTCTTGTTGACGGCGCAAAGTCAATTTATTTTGATGATGTACCCCTTCAAAATCAAACAGGCTCCTTTAACTACGATAACGTTTACGTAAAAGAAGCCCGAGGCACGCCTTATCAAGACATGATGCAGGGATATGAAAACACGGTTATCCCTATTGAAGTAGGCGCAGAAGTCAAAAACGGCTTCCCCGTTGTTCGATCAATTACAGAGACAATCGCTGACAAAGTTCGTTGCGGCATCACTATTCCTTATCTCTACAGAGTCGATAATGGCTTAAAAAAGACCTCTATTGAGTTCAAGTTTGAAATCGCTATTAACAATGACGACTTTGTCGATTACGGCACTCAAAGGGTTGAAGGCAAAACTTCTTCTCAGTATCAAAGAAGCTACACGTTTAACCTTCCTCAGCGGGATTCTAAGGGCAAAGCGCCCGAACGTTGGTTAATCAGACTGACAAAGCTGTCTCCCGAAGCGGATGATGACTATGTGGCGGCGTTGAGTTTTACAACGATGTTTCTGATTTCAGAAACAAAGCTCAATTATCCGAACTCGGCCATCATTGGTATCTCTGCGACGGCTGAGAATCTTTCTTCTATTCCGACACGTTCTTACATTGTTGACGGCTTGATTCTTCAGGTTCCGAGCAACTATGACAAGAAGTCCAACACTTATAACGGAATTTGGGACGGCACCTTCAAGATGGAGGTTACCGACAATCCCGCTTGGATTCTCTATGGCCTGCTGACTAATACTCGTTGGGGTTTAGGCGAATTCATTAAGCCTGAGCAGATCAACAAAGCAAAGCTCTATGAGATCGGCCGTTATTGTGATGAACTGGTTGATGACGGCTTAGGTAAGAAAGAAAAACGATTCTCAATTAACACTCAGGTTACTGAGCGTTCTGAGGCCTATGAGTTAATCAACTCCATTACTTCTGTCTTCAGAGGTATGACCTATTGGGCTATGGGTCAGGCAAACTTCACGTGCGATAAGCCCACTGAGCCGTCTGTTCTTTTTACTCAAGCCAATGTTGTCAACGGAGAGTTTCGTTACGCTGGTTCTTCCAGAAACGAACATCATTCAGTTGCTTTAATCACTTGGAACGACCCCGATCAAAACTACAAACAGGTTGTAGAGTATGTTGAAGATCGAGAGCTGATTGAAAAATGGGGCGTTAGACAGTCTGAATTAACGCTTTTCGGCTGTACCTCTCGTGCTCAAGCAATTCGTGCTGGTAAGTGGATTCTCTACACTGAGCAGTATGAATCCGACATGATTTCATTTACTGTCGGTTTGGATGCCGCTTTAGTGCTTCCGGGCGACATTATCAAGATTCACGATCCATATCATGCTGGCAGAAGACTTGGCGGAAGATTAAAGTCTTGTACAACTACTTCAGCCGTTCTTGATGCAGTAACGCAGTTAAAGAGTGAAGCTAATCCGAAGATTTCAATTCGGATGCCTGACAATACATTCGTCACGAGAACACTGAAAATCTCCGATGACGAGCCAAGAGCTGAAGTCTTTTGGGACGAACCTCTGCCCGAACTTCCCGTTGACTATGCAATTTGGATTATCGAAGAAGAAAATCTCGTACCTCAGATTGCACGTGTCGTAAACATCGCTCAGGGCGAAGACAAGGGCACCTTCAACATTGATTGTATTAGCTACAACAAAGGCAAGTACGATCTGATTGAGAAGGGTTGGGAGATTCAGCTTCCCAATACCTCTGAAATTGACCCGTATGATGTTGGCAAGCCAAATAACCTCAACATCTCGGTTTCCATTTCTAAGTCTGCTACAGGTATTAGAACAGGTAATCTTGAGCTTTCTTGGACGGCTGGTAAGAACAATGCTTCTTGGGTTGTCGAGTATCGAACGGAAGACAAGGACGGCAACGGTGACGAATGGACTTCTGTTGAAGTTAACTCTCCGTACTACACAATCTCTAACGCTCAGAACGGTCTTTATCACATCAAGATTTATGCCAAGGGTGTGCTTGGTACGCTTTCTACCGAACTTGAGACTTATTACGACGCTGAAGATTCTTTACCGTCTCCTGACGATATTCAGGACTTTACGATTACTAAGCGCTCGACTTACTTACAGCTTGACTGGACACCCGTTGAAGGTGCTCTCGGTTATGAAATCAGAATCGGCGATTCTTGGGATGCTGGCGAAGCAATTATTACGAACTTCGCAGGTAACTCGTTTGTTCACTATCAGGATAAAGCGGGTATCTATTACTACCATATTCGAGCGATTAACTCCGACGGCAGTCTCTCTAAGCACGTCACAACAACAAGATTAGACCTGCATGCTCCGATTACACCTGAAAACTTCCAAGTCGTGCGTTCTAATGAGCGTCTTGAGCTGAAGTGGGACAGCAACCCCGAAACCGATATTACTTTCTATGAAATCCGAGAAGGTATTAACTGGACGGCTTCTACGCTTGTTTGTCAGTCAAAACTCAATCATGCGACTATTCCGGTTGGCGCACAGACAAGAAGAAAATTCTGGATTAAAGCAGTTTGTATGCCGGGAATTTATTCTGAGTCTGCTGACTGGTATGAAATCGGTGTAACCAACGATAAAGATAAGAACATCATCATCGAAATGCACGAGCGTGGATTGGGTTTCTCTAACCACAGAGTGTATATGTCTGATCGAGGTGACGATCTTGTCATGGATGATGATAGAAAGCGTTCGGAATACATCATTCCAGTTGATCTCTTCAAGAAGCATTATGCACACAACTCTTTCTCAACCTCTGTCACAACGATTGCTTGCACAGGTGAAGATACAACTACTTGGGAAGATTTAACGTGCGACTTTGAAGCTCCTGGCGCAGAACGGGCTTGGAACTTAGAAGGAGATCAAGACGGTATCGTTGCTTATAAGCAGATTGCTCTTGAGTATCCGTTAGGCTCTTCGGATATTGAAGGAATTTCCCTTGAAAACACAACCGATACGCTTTCGGGCAAACAGGCAATATCAGCTCAAGCGCACTATGAACCTGCCCGATACGCTCTTGGAATGACAATGAACTTGATCACAAGCGCTCAGTGGCAGTTAGTTGATATGCCAGAGCACTTCAAGTTCAGTTTTTGGTTTAAGGCCAAAGATCAGGGTCGGAATAAGTGCGCTGAGATTCTGATGATGCAGACTCAAGACGGCACTGGCTGGTACAAGATTTACTACAACACGGAAGAAAAGACATTAAATCTTGCTTGCAGTGACGGCAAAGACATCTCTTTTGAAACTGAGTTTCTTGCAGATGATTACTTCTGTATTGCTTTCTATCAAACAAACGTCACTCGTGGCTTTGGTTACGGCATTCTTGGCAAGCAAGTTGAGTTCAAAACGACACCCGCATTTCCACAGGGTCAAATAAAACTATTGTCAGTGGGGAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e55e9559a6408aacc0483f84922247e2319541f40fa9f31e7bdc2a91372c460d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8410
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50