Protein

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Genbank accession
QIG70416.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MSLKVGYESVPTEAEHYFEQHRWEWQDRFLRGSTALYDPIFTPLFTSLFTTLGFSATTAALLGAGAAAIATTALAIGIQALLAPKPPKPEDGKVPKVQSVPYRWWGVGRNRVAGAYMLWEAVGKKLFAVQAIAGHRIKSINRYWLHDDEVTLQGDGTINSGTNYRTNVQILSRLGLVPETDYPPITSALSSQGVWSSNHRGDGQASVAMICTSSNAERQQKTFPYGPPQLSVEADMALCWDFRDPLQDPENPATWQWTRNAALIMAWHQCFNEFGHKRDYTRAILPVLDMWQEEADVCDELVPLAGGGNERRYECNGFDTTENDPKAATNAILASCDGWICERGDGALLFIVGKFRAKYLTTLTDADIVGHQIEYDVLFEDECNRLVPKFCYPEIGYATSDTDYFEDVGAQLIAGRVLAQEANYQWVQQWRQARRLGKRDWLRLQQKVTGQLNVRLSGINSVYSRWVRLVTPNMLPRLDGKIVENRKSVLSLLQGGFVMDIMQHPENIDVWNPATDEGRQPSTPPRTTPTGILTPVINLVQARPNGDSVYVRVVIIDPEDNSLIPVVRYRLVDAGSRVPGAWVEQRFPNPVPAGGFIDMSTNVVPSNKALDVQVAFIASDGDYGPWSITANVTSTVDPTAPATPVNMTTSNASGTVTVSATAANDNTRYLVFKRGTTGQSFAAATLIGQYNVTANQTISFPNTPGAGTWKYWCGAENGSGIPSPSQASSTITI
Physico‐chemical
properties
protein length:733 AA
molecular weight: 80712,97060 Da
isoelectric point:5,48396
aromaticity:0,09550
hydropathy:-0,26467

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG70416.1
1 733
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,9078
Central domain 13 211 200 0,0628
C-terminal 212 733 521 0,2903
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-733

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N28_2
[NCBI] 		2509584 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG70416.1 [NCBI]
Genbank nucleotide accession
MN988516.1 [NCBI]
CDS location
range 21762 -> 23963
strand +
CDS
ATGAGCCTTAAAGTTGGCTATGAGAGCGTGCCGACAGAGGCAGAGCACTATTTCGAGCAGCACAGATGGGAATGGCAGGATCGCTTTCTGCGTGGCAGCACAGCGCTTTACGACCCGATCTTCACGCCGCTGTTCACCAGTCTGTTCACGACCTTGGGGTTTTCTGCGACCACGGCGGCCCTGCTCGGCGCCGGCGCGGCTGCAATTGCAACCACGGCGCTCGCGATCGGCATCCAGGCGCTGCTGGCTCCAAAGCCGCCGAAGCCCGAAGATGGGAAGGTGCCGAAAGTTCAGTCTGTCCCCTACCGCTGGTGGGGGGTGGGCAGAAACCGCGTTGCCGGCGCTTACATGCTGTGGGAAGCCGTCGGCAAGAAGCTCTTCGCAGTTCAGGCCATTGCGGGTCACAGGATCAAATCGATCAACCGCTATTGGCTCCACGACGATGAAGTGACGCTGCAGGGCGACGGGACGATCAACTCGGGCACCAATTACAGGACAAATGTCCAAATCCTCAGCCGCCTCGGATTGGTCCCGGAGACCGATTATCCTCCGATCACCTCGGCACTTTCCAGCCAAGGCGTGTGGTCGAGCAATCACCGGGGAGACGGGCAGGCATCGGTCGCGATGATCTGCACCAGCTCCAACGCCGAGCGGCAGCAGAAGACGTTCCCCTACGGGCCGCCGCAATTGTCGGTGGAAGCTGACATGGCGCTCTGCTGGGATTTCCGCGATCCCCTTCAGGATCCGGAGAACCCGGCAACATGGCAGTGGACGCGAAACGCTGCGCTGATCATGGCATGGCATCAGTGCTTCAATGAGTTCGGCCATAAGCGGGACTATACGCGGGCCATCCTGCCAGTCCTCGACATGTGGCAGGAAGAAGCCGACGTTTGCGATGAGCTGGTGCCGCTGGCCGGCGGCGGCAATGAGCGCCGCTACGAGTGCAATGGCTTCGACACGACCGAAAACGATCCGAAGGCTGCCACGAACGCAATCCTCGCCTCCTGCGACGGCTGGATATGCGAGCGCGGCGATGGTGCGCTGCTATTCATCGTCGGCAAGTTCCGGGCGAAGTATCTCACGACCCTGACGGATGCCGATATCGTCGGGCACCAGATCGAATATGACGTCCTCTTCGAGGATGAGTGCAACCGCCTTGTCCCCAAGTTTTGCTATCCGGAAATCGGCTACGCCACTTCCGACACCGATTATTTCGAGGATGTTGGCGCTCAGCTCATCGCCGGCCGAGTGCTGGCGCAGGAAGCGAACTACCAGTGGGTTCAGCAATGGCGGCAGGCCCGTCGGCTTGGCAAGCGCGACTGGCTTCGCCTTCAGCAGAAGGTGACGGGGCAGCTCAACGTTCGGCTGTCCGGTATCAACTCGGTCTACAGCCGGTGGGTTCGTCTCGTGACCCCGAACATGCTCCCGAGGCTTGACGGCAAGATCGTCGAGAACCGCAAGTCGGTGCTCTCTCTCCTGCAGGGCGGCTTCGTGATGGACATTATGCAGCACCCGGAAAACATCGACGTCTGGAACCCCGCGACGGACGAGGGGAGGCAACCGTCGACACCACCAAGGACGACCCCCACGGGGATCTTGACGCCCGTAATTAATCTTGTTCAGGCCAGACCGAACGGCGACAGCGTTTACGTCCGTGTGGTTATAATTGACCCGGAAGACAATAGCCTTATCCCTGTCGTTCGCTATCGCCTCGTGGATGCAGGCTCTCGGGTTCCTGGCGCTTGGGTCGAGCAACGGTTTCCAAACCCTGTCCCGGCCGGCGGATTCATCGACATGAGCACGAACGTCGTGCCATCGAACAAGGCTCTCGATGTGCAGGTCGCCTTCATCGCCTCCGATGGGGACTATGGGCCGTGGTCAATCACGGCGAATGTCACCTCGACCGTTGACCCGACAGCGCCGGCCACGCCGGTCAACATGACGACCAGCAATGCTTCTGGGACGGTCACGGTCAGCGCGACAGCGGCAAACGACAACACGCGATACCTCGTCTTTAAGCGCGGAACGACCGGCCAAAGCTTCGCCGCCGCAACGCTGATCGGGCAATACAACGTCACTGCAAACCAGACGATCAGCTTCCCCAACACACCAGGGGCGGGGACGTGGAAATACTGGTGCGGGGCCGAAAACGGCTCTGGCATCCCATCGCCTTCGCAGGCCTCATCCACCATCACAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
062099b124e866e3c2967f15234d76b524aab5d986310f87f4693468ada01073
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank