Protein

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Genbank accession
WNL51045.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MALNFPTDTTSPYVDPTTGLKYVYNAAVGAWESALQPPVIVAASTPQTAIEGFLWFNTADNTLYVYRSGAWNAVSTSAPSGSQVNVSSTGPATPSGGDLWWDSVLGQLFIYYTDPDGGNAWLPASPSLTALAGSVYINSSAPALPEVGDMWLRDYDNLFRIWNGAAWVQPLNEITGVQSVSGTTPINVDNTDSANPVISVSQATNSSTGSVRIATQAETNAATDTSVALTPGTLASGIANYLPATSETVSGTIELATQAEVDAGTDTTRAITPATLSGAATILGLATPVGTVSAYAGSSAPAAYLLCDGAAVSRTTYSDLFAVIGTTYGPGDGSTTFNLPDLRGEFIRGFDAGKGTDAGRVLGSFQADELKQHSHDFVTGVTGDADAGGGDRDNDAGLASTNNFGGSETRPRNIALNYIIKF
Physico‐chemical
properties
protein length:422 AA
molecular weight: 43462,10130 Da
isoelectric point:4,09959
aromaticity:0,08768
hydropathy:-0,04905

Domains

Domains [InterPro]
DC_1413
STR
3–422
DC_1413
IPR037053
ATT
279–343
IPR037053 IPR010917
SSF88874
STR
285–421
SSF88874
IPR011083
ATT
290–347
IPR011083
WNL51045.1
1 422
Architecture
STR
ATT
STR
STR 3-278 | ATT 279-347 | STR 348-422
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51045.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 93309 -> 94577
strand +
CDS
ATGGCACTTAATTTCCCCACCGATACTACCAGTCCTTACGTTGATCCCACAACGGGACTTAAATATGTCTATAACGCTGCGGTTGGTGCTTGGGAAAGTGCGCTACAACCTCCTGTTATTGTTGCTGCGTCTACACCACAGACTGCTATTGAAGGTTTCCTGTGGTTCAATACTGCAGACAACACCCTCTATGTTTACAGGTCTGGTGCCTGGAACGCTGTAAGTACTTCAGCACCTTCTGGTTCTCAGGTTAACGTTTCTTCTACTGGTCCCGCAACTCCTTCTGGTGGAGACCTTTGGTGGGATAGTGTATTGGGTCAGTTGTTCATCTACTACACCGACCCCGACGGTGGTAACGCTTGGTTGCCAGCATCTCCCTCCCTGACTGCACTGGCAGGAAGTGTGTATATTAACTCTTCTGCACCTGCTTTGCCTGAAGTTGGTGATATGTGGTTGAGAGACTACGACAACCTCTTTAGAATCTGGAATGGTGCCGCTTGGGTCCAACCCCTTAACGAAATTACTGGAGTTCAGTCTGTAAGTGGTACGACTCCAATCAACGTAGATAACACAGATTCGGCAAACCCCGTTATTAGTGTTTCTCAAGCAACAAACTCTTCAACGGGTAGTGTTCGTATTGCCACCCAGGCGGAGACAAACGCAGCGACCGACACCAGTGTGGCACTTACACCTGGAACCCTAGCAAGCGGAATCGCTAACTATCTTCCCGCGACTTCCGAGACTGTTAGTGGAACTATCGAACTTGCCACTCAGGCAGAAGTTGATGCCGGAACAGACACAACTCGCGCTATCACTCCAGCAACTCTGTCTGGTGCTGCTACTATTCTCGGTCTGGCAACTCCTGTCGGTACCGTTAGTGCTTATGCCGGTTCTAGTGCCCCTGCTGCTTATCTCTTATGTGACGGTGCAGCAGTAAGTAGAACGACTTACTCTGACCTGTTTGCTGTTATTGGAACGACTTACGGTCCCGGTGACGGAAGCACAACCTTCAACCTCCCCGACCTCCGTGGTGAGTTTATTCGTGGTTTTGACGCTGGTAAGGGCACTGACGCTGGTCGTGTTCTTGGTAGTTTCCAGGCAGACGAACTGAAGCAACACAGTCACGATTTCGTAACTGGTGTCACCGGAGACGCAGACGCTGGTGGTGGTGACCGCGACAACGACGCCGGACTTGCTAGCACAAATAACTTTGGTGGTAGTGAGACCCGTCCTCGTAACATTGCTCTCAACTACATCATTAAGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b846f1efab976392fb237bd7feebffd5e75547284b798b402952f920a961789
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8229
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank