Protein

View in Explore
Genbank accession
WNO24718.1 [GenBank]
Protein name
L-shaped tail fiber protein pb1
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEAAAESAAAAKDSEIAAKDSENKAKDSEIQAGIHAGASEASATQSAASAAESERQANLSQGSAENSAASALESKNFKDASELAAQNAEQSKILAEQAQRAAEAAQSGAKASENKASAFATQAAASSASAGDFAAAAKQSELNAKTSETNAATSEVEAETQAETATTEANRAKAEADRAAQIVDSKLDKEDISGFIKVYKTKEEADADVSSRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVETEQKLVSINNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYSDTWEAIEAGLIPSVTEEQWQAGATLYFSTGNGTTTFRLPDMMQGQAFRAAAKGEENAGNIKEQIPYITMINGKAPADDGTITLGNAADKNVWNGIDGEVLLRGAFGLGGTGLILNEPDAVSFFKAMRAFGSGYYRNDSESNPVIPKYSAGFYSKTADTHTFICSAYGNGVTFAATINDALLDGENPTVHTNILYGTANKPDLNTDTQGVLGVEKGGTGATTQKGARLNLDTPVGSRAIGMPNNSDVLAFMKSSAESGYYSSGNIVTGVPETAGWYMFDLHVHGKNAAGEMEYGNVYCTTSAGAIWYTLMEVGVWQPWRRLTTEHGIIPITSGGTGTNNANDARINLGLGPINAPTFSGMTLQGTNETTSGIAVFSNRNAEGTQLSYSRMYHEIQSGVGKTTIQTTREGGATNYFQIDEYGNIGNINSIIAYGYMGLGAANAMGNASIAIGDSDSGLKWNSDGNISTVADGVKIATWTPHGFYTHKIISSDVANTERGMYVNGVRTTGASALVAGVIEAGSHVGWRDRASGMLVELNTRGAAANIWKATRWGDQHAGASDIVIYDDGSPYYRTLVGGGEFGFNGLGQATCTSWISTSDIRLKAQLKEIVSAKDKVKSLQGYTYFKRNSLVEDEHSFYCEEAGLIAQDVQTVLPEAVYKIANSDLLGVNYSGVTALLANAVKEMLADAEAQEARISNLEEELAELKALIATLVNK
Physico‐chemical
properties
protein length:1071 AA
molecular weight: 113016,65350 Da
isoelectric point:4,76910
aromaticity:0,07470
hydropathy:-0,27815

Domains

Domains [InterPro]
DC_0608
ATT
2–580
DC_0608 DC_1942
Coil
Unmapped
142–162
Coil Coil IPR030392
IPR030392
CHP
954–1014
IPR030392 Coil
WNO24718.1
1 1071
Architecture
ATT
ATT
ATT 2-580 | ATT 710-1071
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO24718.1
1 1071
Domain Start End Length (AA) Confidence
N-terminal 1 445 445 0,9126
Central domain 446 644 200 0,2839
C-terminal 645 1071 426 0,7706
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-445
Central
446-644
C-terminal
645-1071

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PRF-SP12
[NCBI] 		3074847 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO24718.1 [NCBI]
Genbank nucleotide accession
OR400517.1 [NCBI]
CDS location
range 3570 -> 6785
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAACTAACAGCGGCTGTTGAAGCCGCTGCAGAGTCTGCTGCTGCTGCTAAAGATTCTGAAATAGCAGCTAAAGACTCTGAAAATAAAGCTAAAGATTCGGAAATTCAAGCGGGTATTCATGCTGGTGCTTCTGAGGCTTCAGCAACCCAGTCTGCTGCTTCTGCTGCTGAATCTGAAAGACAAGCTAACTTATCTCAAGGTAGTGCGGAAAACTCTGCTGCTTCTGCTTTAGAATCTAAGAATTTTAAAGATGCTTCGGAACTTGCTGCTCAAAATGCAGAGCAGAGTAAGATTTTAGCAGAGCAAGCTCAAAGAGCGGCAGAAGCTGCCCAGTCTGGTGCTAAAGCTTCTGAAAATAAAGCATCAGCATTTGCTACACAAGCTGCTGCATCTTCAGCTTCCGCAGGAGATTTTGCTGCAGCCGCTAAACAATCTGAATTAAATGCTAAAACTTCTGAAACCAATGCCGCAACATCAGAAGTGGAAGCGGAAACCCAAGCTGAAACTGCTACTACTGAGGCAAATCGTGCTAAGGCTGAAGCCGATCGCGCAGCTCAGATTGTAGATAGTAAGTTAGATAAAGAAGATATATCTGGCTTTATCAAAGTCTACAAGACTAAAGAAGAAGCGGACGCCGACGTTAGTAGCCGCGTACTAGGTGAAAAGATCCTAGTGTGGAACCAAACTGACTCAAAATATGGATGGTATAAAGTAGCTGGAACTGCTGAGGCTCCAGTATTAGAGTTAGTAGAGACAGAGCAAAAGCTAGTTTCTATTAATAACGTTCGTGCAGATGACGCAGGTAACGTACAGATTACTCTTCCTGGTGGTAATCCTTCCTTATGGTTGGGTGAAGTTACTTGGTTCCCTTATGACAAAGATTCAGGTGTTGGCTATCCTGGTGTTCTCCCTGCTGATGGCCGCGAAGTCCTTCGTGTAGACTATTCAGATACGTGGGAGGCTATCGAAGCCGGTCTGATTCCTTCTGTTACTGAAGAACAATGGCAAGCTGGTGCAACTCTCTACTTCTCCACTGGTAATGGTACTACTACTTTCCGCCTACCTGATATGATGCAGGGCCAAGCATTCCGTGCTGCTGCAAAAGGAGAGGAAAACGCTGGTAATATTAAAGAGCAAATCCCGTACATCACTATGATTAATGGTAAAGCTCCTGCTGACGATGGTACAATTACTTTAGGTAATGCTGCGGATAAAAACGTATGGAATGGTATTGATGGTGAAGTACTGTTAAGAGGTGCTTTTGGTCTTGGAGGTACTGGTTTAATTCTTAATGAACCTGATGCTGTTTCCTTCTTTAAAGCAATGCGTGCTTTTGGTTCAGGATATTATAGAAATGACTCTGAAAGTAACCCAGTAATCCCTAAATACTCTGCAGGATTCTACTCCAAAACTGCCGACACTCATACTTTTATCTGTTCTGCTTATGGTAATGGTGTTACTTTCGCAGCTACTATAAATGATGCATTATTAGATGGAGAAAATCCTACTGTACATACAAATATTCTTTATGGTACAGCAAATAAACCTGATCTGAATACCGATACTCAAGGAGTTTTAGGAGTAGAGAAGGGCGGTACTGGTGCTACTACGCAGAAAGGTGCTAGACTAAATCTGGATACTCCTGTAGGCAGCAGAGCTATTGGAATGCCTAATAACTCTGATGTACTAGCTTTCATGAAATCTTCCGCAGAAAGCGGATATTATTCCTCTGGTAATATAGTTACTGGAGTTCCAGAAACTGCAGGATGGTATATGTTCGATCTCCATGTACATGGTAAGAATGCTGCGGGAGAAATGGAGTATGGTAATGTATACTGTACAACAAGTGCTGGTGCTATTTGGTACACCTTAATGGAGGTTGGTGTATGGCAGCCATGGAGACGTTTGACCACAGAACATGGTATTATTCCTATTACTTCAGGGGGTACTGGTACAAATAATGCAAATGACGCAAGAATAAATCTAGGTCTTGGTCCTATAAATGCACCTACTTTTAGTGGTATGACTCTTCAGGGTACTAATGAAACTACTTCAGGTATAGCGGTTTTTAGTAATAGAAATGCGGAAGGGACTCAACTTTCCTATTCTAGAATGTACCATGAAATTCAGAGTGGTGTTGGTAAAACTACTATTCAGACTACAAGAGAGGGCGGGGCGACTAACTATTTCCAAATTGATGAGTATGGTAATATTGGGAATATTAACTCAATTATTGCATATGGATACATGGGATTAGGTGCTGCTAATGCTATGGGAAACGCCTCTATTGCGATTGGTGACTCTGACTCTGGGCTAAAATGGAATAGTGATGGTAACATAAGTACTGTAGCAGATGGTGTAAAAATAGCCACATGGACACCTCATGGATTTTATACACATAAAATAATAAGCTCAGATGTTGCTAATACCGAAAGAGGGATGTATGTAAACGGGGTTAGGACTACCGGTGCCTCCGCTCTTGTAGCTGGGGTTATAGAAGCTGGATCTCATGTTGGTTGGAGAGATAGAGCTTCAGGTATGCTTGTTGAATTGAATACTAGAGGAGCTGCTGCCAATATCTGGAAAGCAACTAGATGGGGTGACCAACATGCTGGTGCATCTGACATCGTTATTTATGATGATGGATCTCCTTATTATAGAACTCTTGTAGGCGGTGGTGAATTTGGGTTCAATGGCCTTGGACAAGCTACCTGTACTTCTTGGATCAGTACATCTGATATTAGGCTTAAGGCACAGCTAAAAGAGATAGTATCTGCTAAAGATAAGGTAAAATCCCTACAGGGGTACACTTATTTTAAACGTAATAGTTTGGTTGAAGATGAGCATTCCTTTTATTGTGAAGAGGCAGGATTAATCGCACAAGATGTTCAAACTGTACTACCTGAAGCTGTATATAAAATAGCTAACTCAGATCTTCTCGGTGTTAATTACTCTGGTGTTACCGCATTATTGGCTAACGCAGTAAAAGAGATGTTGGCGGATGCGGAGGCTCAGGAAGCTCGTATCAGTAATCTAGAAGAAGAACTGGCAGAGTTAAAAGCTCTAATAGCCACTCTGGTAAATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62c314b1ae2f5359aca0010208d5bba25f7f8227917185fcfd6fa41e51470542
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5992
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50