Protein

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Genbank accession
AXF41506.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MADVKLPSIYPRGVGAKSLIGIDGLKFSRNFGSSRKDVANIPVNGDEYLFVVDSKQTISGLYFITFTNPDNEKLMILASANGRQSADSGSNTLNILSISNPGPIYLKDVDLRANASTDVGLLLKIGTNGAGTHGPLSCSIVHIGSQIEVSPNLNYNNYTNNIDASIINPKNILRVDDITNVDLNNIKENSINLCQPASVNSRPDFNGVGVCMTFAFGDKVNQIFVSENRKMYFRSTGTSWEEALSDDKYPKLVKSGIQFVAAGTGTQLIRISVGNIDLTNEAYVINMSTQYDNIDLSPTPQIADRGYGFFDIVLKTAWAGVINYNISEAYAPSNAPRYNMYAGRLDGSDTTPVTSVEEGQTVRFVLSTLNVPNGTLIPFLITGVTETDIGIPLSGNFTIMNSSGVIDVPVIKDMTPEGQETMTLTLQNGSGVSASMIIQDTSIAPEFNVYFSSDIQGNMPVTDLKDGFVLYVQVVGIVYDPQQTYRLSFEGSDFASSLINSVPNEIDVSLDNNGRFYYPLLFNQPVVNEIVINISTDMVDLNLYNFAKSKGVDVTNPVNIKFTQNYGTVVVASSTAISAITVGDFPYGSKIKYVNFGSVWGRGGQGGYAISPLNTTNFNGEDGGSCISGSNNNFLIFENYGVVAGGGGGGGASGVGASTEMSNRNAWHPIVAGSGGAPYGITPKMMYTPQTLISPDLQSWPIWTDAYDFSAYSKNDKVYRRYPSGQEVQTDVGPVGNATTAPQQYDPTMRPMKPGNGGDIGADGSDGIFNYTGTWYVALAPGKGGLKGKIIETNEHNVDIRNYSGWISGR
Physico‐chemical
properties
protein length:810 AA
molecular weight: 87023,30350 Da
isoelectric point:4,69447
aromaticity:0,09506
hydropathy:-0,16383

Domains

Domains [InterPro]
DC_1103
STR
1–655
DC_1103
IPR007932
RBD
556–682
IPR007932
AXF41506.1
1 810
Architecture
STR
RBD
STR 1-655 | RBD 656-682 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF41506.1
1 810
Domain Start End Length (AA) Confidence
N-terminal 1 580 580 0,8463
Central domain 581 799 220 0,9774
C-terminal 800 810 10 0,2189
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-580
Central
581-799
C-terminal
800-810

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15599
[NCBI] 		2202135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41506.1 [NCBI]
Genbank nucleotide accession
MH517022 [NCBI]
CDS location
range 103209 -> 105641
strand -
CDS
ATGGCTGACGTGAAATTACCATCCATCTACCCTAGAGGAGTTGGAGCAAAAAGCCTCATTGGTATCGATGGATTGAAATTCTCTAGAAATTTTGGCAGCTCAAGAAAGGATGTTGCTAATATTCCTGTTAATGGCGATGAATATTTATTTGTTGTAGACTCAAAACAAACCATAAGTGGTCTGTATTTCATTACATTCACTAACCCAGATAATGAAAAACTCATGATCCTGGCTTCAGCTAATGGAAGACAATCAGCTGATTCAGGTAGTAACACACTCAACATCTTGAGCATCTCAAACCCAGGCCCAATTTATCTCAAAGATGTTGATTTAAGAGCTAATGCATCAACAGATGTAGGTTTGTTATTGAAAATTGGAACCAACGGCGCTGGAACTCACGGCCCATTAAGTTGCTCAATTGTTCATATTGGTTCACAGATAGAAGTCTCTCCAAATCTCAATTATAACAATTACACTAATAATATTGACGCCTCTATCATTAATCCAAAGAATATTCTAAGAGTTGATGACATTACAAATGTTGATTTGAATAATATCAAAGAAAACTCCATCAATTTATGTCAACCAGCTTCTGTTAATTCTAGACCAGATTTCAACGGGGTTGGCGTTTGTATGACCTTTGCCTTTGGCGATAAGGTCAATCAGATATTTGTCTCAGAAAACAGAAAGATGTATTTCAGATCAACGGGTACAAGTTGGGAGGAAGCATTAAGTGATGACAAATATCCTAAACTGGTCAAAAGTGGTATTCAATTTGTAGCAGCTGGTACTGGAACCCAATTGATCAGAATAAGCGTAGGCAACATTGATCTTACCAACGAAGCTTATGTTATCAATATGTCTACCCAATATGATAACATTGATCTATCTCCAACTCCTCAGATTGCTGATAGAGGTTATGGATTCTTTGATATTGTTTTGAAGACAGCTTGGGCGGGCGTAATCAATTATAACATATCAGAGGCTTACGCTCCTTCTAACGCGCCAAGATATAATATGTATGCTGGACGCTTAGATGGGTCAGATACAACTCCAGTTACTTCGGTTGAGGAGGGGCAAACTGTAAGATTCGTTCTTTCGACTTTGAATGTCCCTAACGGTACGCTGATTCCATTTTTGATTACTGGCGTTACAGAGACCGATATTGGTATCCCATTATCTGGTAATTTCACTATCATGAACTCCTCTGGTGTAATAGATGTTCCAGTAATCAAAGATATGACACCAGAAGGTCAAGAAACAATGACCCTAACATTACAAAATGGTTCTGGCGTGTCAGCTTCTATGATAATTCAAGATACTTCAATTGCACCTGAATTTAATGTATATTTCTCTTCTGATATCCAAGGTAATATGCCTGTCACTGATCTGAAAGATGGATTTGTATTATATGTTCAGGTCGTGGGTATTGTTTATGACCCTCAGCAAACATATAGACTTTCCTTTGAAGGTTCCGACTTTGCATCCTCTCTTATCAACTCCGTTCCCAATGAGATAGATGTTTCACTGGATAATAACGGGCGCTTTTATTATCCGTTGTTGTTTAACCAACCAGTTGTAAATGAAATTGTTATTAACATTTCTACAGATATGGTTGATTTGAATCTTTACAATTTTGCTAAGTCAAAGGGCGTAGATGTAACCAACCCTGTGAACATCAAGTTTACTCAAAACTATGGAACGGTTGTTGTAGCATCGTCTACTGCCATCTCAGCTATCACTGTTGGAGATTTCCCTTATGGGTCAAAGATCAAGTATGTAAACTTTGGTTCTGTCTGGGGCAGAGGTGGTCAAGGTGGATATGCAATATCCCCTTTGAATACAACAAACTTTAATGGAGAGGATGGCGGGAGTTGTATATCTGGATCAAATAACAATTTCTTGATCTTTGAGAACTATGGAGTTGTAGCTGGAGGCGGCGGCGGAGGTGGCGCTTCTGGTGTGGGCGCAAGTACTGAAATGAGTAACCGAAACGCTTGGCACCCTATTGTAGCTGGAAGCGGCGGCGCTCCTTATGGAATTACGCCTAAAATGATGTACACGCCTCAAACTCTAATTTCTCCCGATCTACAGTCTTGGCCGATCTGGACTGATGCTTACGACTTTTCAGCCTATTCCAAAAATGATAAAGTTTATAGACGATACCCGTCTGGACAAGAAGTTCAAACAGACGTTGGACCAGTAGGGAACGCTACAACGGCTCCTCAACAGTATGACCCAACTATGCGCCCTATGAAACCAGGCAATGGCGGCGACATTGGAGCCGACGGCAGTGACGGAATATTCAACTATACTGGTACTTGGTATGTTGCTTTAGCTCCAGGCAAGGGCGGTTTGAAGGGTAAAATTATTGAAACAAATGAACATAATGTAGATATCAGAAACTATTCTGGTTGGATTTCTGGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f84f7960a325a87efb45d36b989dcb2c1a6eb134232bbdd92ff0944532a87a9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of SH-Ab 15599, a novel bacteriophage targeting carbapenem-resistant Acinetobacter baumannii Ji,J., Wang,R., Luo,T., Xu,M., Guo,X., Hu,F., Li,M. and He,P. 2011-05-01 — GenBank