Protein

View in Explore
Genbank accession
QCG76183.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MSNLNDFFGSSGSEGGGAEVKRLDDLVDVSVASPTNGQTLVFDNTGWVNRKLSYNDLSNLPSISNTLSGLDDVDTAGTIAGYVLQFNGIKWVGMPASSSISLDDLSNVAITAPSINQTLLFNGSTWYNGSVDFNNLINTPVIPTQLGDLSDVSVSASTQEGSVLVFRTGQWIGSVINYNDLSNTPTIPQNNSFTFLGLSDTNDIPEANGFLKWNNLSTEIEYVTSIPSSAISGLANVATTGLLSNLVDVNVNGVSNGQVLTYNSSSSTWVPTTPSTGGGVSDPTAIFSTDGNTYINTEELVDELVLKTGPSSGNVNIILGGGGKIVVEGQSPEIISETSLKLTGSNLYLNELSWPTTDGTSGQVLATDGNGNLSFITVSSGGTTILINWRGEWEETSYNINDAVSYAGSSYICVAEVAGGDISVPPSNTNLNWNILALKGEDGSFFTYTGTYDSNTEYVDKDVVYYNGSSYVVLDGQGPITGITPTDQSKWGILALAGSGGTGSGFTYKNEYNNSETYQDQDVVSYGGSSYIVSPGNGPVTGILPTDSSIWGIIALKGQDGSGTGNQSLEDLTDVSSATPTSGNVLVANGSSWSSSKLSYSQLQGLPTLSVVATSGSYNDLLDKPSNTGTFIGLSDTDTPSLPNGFLKWNAQGTSISYVQSISSESISGLATVATTGDYSDLTNTPNIPVVLDDLTDVNLVTPPVTGQALVYNGTYWLAGNAGSGSSTLASLTDVNLTTPTNNQVLSYDNTQNLWINTQIDYDDILNTPSIPVNNSFSLVGLNDTDNSAIPNAFLKWNSTGNSVEYVQSISASSITGLSTVATTGDYNDLTNLPSIPENISDLNDVDTSTAPTDGQILIYSAALGKWIPGDQSGTSPSPGGFPGEWLKINYTPGNLIGTIECSPNISYTIVDNVANNNLTLDLVFANRPYPPAGWMWYGYLVTQGRYVLKMQDTTSHPHTLELTTTENPFGTGTGKLSGFQCRVSTTGAQSYGPLQPTHAYVIFGW
Physico‐chemical
properties
protein length:1006 AA
molecular weight: 105814,49860 Da
isoelectric point:4,05003
aromaticity:0,08648
hydropathy:-0,15278

Domains

Domains [InterPro]
DC_0755
ATT
2–97
DC_0755 DC_1797 DC_0165 DC_0755
DC_0755
ATT
91–158
DC_0755 G3DSA:2.10.10.90 DC_1461
QCG76183.1
1 1006
Architecture
ATT
STR
ATT
ATT 2-158 | STR 165-761 | ATT 768-1006
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCG76183.1
1 1006
Domain Start End Length (AA) Confidence
N-terminal 1 877 877 0,9979
Central domain 878 995 119 0,0500
C-terminal 996 1006 10 0,9835
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-877
Central
878-995
C-terminal
996-1006

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_PA5oct
[NCBI] 		2163605 Uroviricota > Caudoviricetes > Arenbergviridae > Wroclawvirus PA5oct >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCG76183.1 [NCBI]
Genbank nucleotide accession
MK797984.1 [NCBI]
CDS location
range 203622 -> 206642
strand +
CDS
ATGTCTAATTTAAATGATTTTTTTGGATCAAGTGGATCAGAAGGCGGGGGAGCCGAAGTTAAAAGACTAGACGACTTAGTAGACGTTTCTGTAGCTAGTCCAACTAACGGTCAAACCCTTGTTTTTGACAACACAGGCTGGGTAAACAGAAAACTTAGCTACAATGATTTATCTAATCTTCCGTCTATATCAAACACATTAAGTGGATTAGATGATGTAGACACTGCCGGTACTATAGCCGGATATGTATTACAATTTAACGGAATAAAATGGGTAGGTATGCCTGCCAGTAGTTCCATTTCGTTAGACGATTTATCTAATGTTGCTATTACAGCACCCTCAATAAACCAAACACTGCTATTTAATGGATCAACATGGTATAACGGATCTGTAGATTTTAATAATTTAATAAACACACCCGTTATTCCTACACAGTTAGGCGATTTGTCAGATGTTTCTGTCAGTGCTTCTACTCAAGAAGGAAGTGTACTAGTTTTTAGAACAGGACAATGGATCGGTTCTGTAATAAATTACAACGATTTGTCAAATACTCCCACAATACCGCAAAACAATTCATTTACATTCTTAGGTTTATCTGACACCAATGATATACCCGAAGCAAATGGATTCTTAAAATGGAACAATTTAAGTACAGAAATAGAATATGTTACTTCAATTCCTTCATCTGCCATATCAGGATTGGCTAATGTTGCAACAACCGGTTTATTATCCAATTTAGTAGATGTGAATGTCAATGGTGTATCTAATGGCCAGGTTCTAACATATAATTCCTCTTCTAGCACATGGGTTCCTACTACACCATCAACTGGCGGCGGAGTAAGCGATCCTACTGCTATTTTTAGTACAGACGGTAATACATATATTAATACTGAAGAGTTAGTAGACGAGCTAGTTTTAAAAACCGGACCTAGTTCTGGAAATGTAAATATCATTCTTGGCGGCGGAGGGAAGATTGTCGTCGAAGGTCAATCTCCGGAAATAATATCGGAAACTAGTTTAAAATTAACAGGTAGCAATTTATATTTAAATGAATTGTCTTGGCCTACAACTGACGGAACTAGCGGTCAAGTTTTAGCTACAGACGGAAACGGAAATCTCTCATTTATAACAGTATCGTCTGGTGGAACTACTATACTTATAAACTGGCGCGGCGAATGGGAAGAAACTAGTTATAATATAAACGACGCTGTAAGTTATGCTGGTTCTAGTTATATATGTGTTGCTGAAGTAGCTGGCGGCGATATTTCTGTTCCGCCTAGCAATACAAACTTAAATTGGAATATACTAGCACTAAAAGGTGAAGACGGATCATTCTTTACTTATACGGGAACTTATGATTCTAATACTGAATATGTAGATAAAGATGTAGTTTATTATAACGGTTCATCTTATGTAGTGTTAGACGGGCAAGGACCTATTACAGGAATCACCCCCACTGACCAATCTAAATGGGGTATATTAGCGTTAGCTGGTTCTGGAGGAACAGGCAGTGGTTTTACTTACAAAAATGAATATAATAATTCGGAAACTTATCAAGACCAAGACGTTGTTAGTTATGGAGGATCTTCATACATTGTTAGTCCTGGCAACGGTCCTGTTACTGGTATTTTGCCTACCGATTCTTCTATTTGGGGTATTATTGCACTCAAGGGTCAAGACGGGTCTGGAACAGGTAACCAGTCGCTTGAAGATTTAACTGATGTATCTAGTGCCACTCCTACTTCAGGGAATGTGTTAGTAGCTAACGGGTCATCATGGTCTTCTTCTAAGTTATCATATAGTCAACTCCAAGGTCTACCCACTTTATCTGTAGTTGCTACTTCTGGTAGTTATAATGACTTATTAGATAAACCTTCTAATACAGGAACATTTATTGGATTATCAGATACTGATACTCCTTCCCTACCGAATGGATTTTTAAAATGGAATGCACAAGGAACATCTATATCTTATGTACAATCAATATCTTCAGAATCTATTTCTGGTTTGGCTACTGTTGCTACTACCGGTGATTATAGCGATTTAACTAATACACCTAACATACCAGTTGTGCTAGACGACTTGACCGATGTGAATTTAGTTACACCTCCTGTAACAGGACAAGCTTTAGTATACAACGGTACGTATTGGTTGGCAGGCAATGCCGGAAGTGGTTCTAGCACACTAGCATCATTAACTGACGTTAACTTAACTACTCCTACCAACAATCAAGTATTATCGTATGACAATACACAAAATTTGTGGATTAATACACAAATCGATTATGATGATATTTTAAATACACCTAGTATACCCGTAAATAATAGCTTTAGCTTGGTTGGGTTGAACGACACGGATAATTCTGCTATTCCGAACGCATTCTTAAAATGGAACTCAACTGGGAATTCAGTAGAATATGTTCAGTCTATTTCTGCTAGTAGTATAACAGGATTATCTACTGTTGCTACAACTGGAGACTACAACGACTTAACTAATTTACCTTCTATTCCAGAAAATATAAGTGATTTAAATGACGTAGATACATCTACTGCACCTACCGATGGTCAAATACTCATATATAGTGCAGCACTAGGAAAATGGATTCCTGGTGATCAAAGCGGTACTAGTCCGTCTCCAGGTGGCTTCCCCGGCGAATGGTTAAAAATCAATTATACCCCCGGCAACTTAATAGGTACAATCGAGTGTTCGCCTAATATATCATACACTATAGTAGATAATGTTGCAAATAATAATCTTACTTTAGATTTAGTATTTGCAAATAGACCATACCCGCCTGCCGGATGGATGTGGTATGGTTACTTAGTAACACAAGGCAGATATGTATTAAAAATGCAAGATACTACTAGTCATCCGCATACGTTAGAGCTTACAACTACTGAAAATCCATTTGGGACAGGAACTGGAAAATTATCAGGATTCCAGTGCAGGGTATCAACTACTGGAGCCCAAAGTTATGGTCCTCTTCAGCCTACGCATGCATATGTGATATTTGGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07fc6ba02e1ec379462aee1dfab43dc73fd4b33f8b61f06740b2c593a16f32e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6018
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Integrative omics analysis of Pseudomonas aeruginosa virus PA5oct highlights the molecular complexity of jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B.G., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., van Noort,V., Drulis-Kawa,Z. and Lavigne,R. 2019 — GenBank
Genomics, Transcriptomics, and structural analysis of Pseudomonas virus PA5oct highlights the molecular complexity among Jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., Kawa,Z. and Lavigne,R. 2019-06-22 — GenBank