Protein

View in Explore
Genbank accession
XCO36445.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLNNLNQPKGSTIGVLKDGRTVQQAFDELFVSLNGVLVAPDWWVIQGTTNVELNGGVFLHGDARFQGKSSVVQLTSSTVAIVANSDGTFSPVTSYPTDGKPVVAHVREGSLAEVVGSLNRSAFIMGNDPITITWLPSELARITERFNIMSSYSPAGGVQFYTDYDITAYRAPSDSLTYHVDIVAGSDTSGDGSVDKPFQRIKKAIEQNPPARVIKIKGGPTPYTRDYTWNVSIVDRDVDIIGYGDQRPVLSGEAESVTFTPVEGRPGVYSATQGLAFRIVDKSVVDKYGHEQVLTNVASLAEVGPGRSFVSGSTITFQLNDSRAPDANVKLILQITNGRVQDNSNVYIENVEFRYSFRGFHAEVMDASKAGAVLRLNNCKFGLTCTENSFNSRGYNVVAVGCIAEYGMQDAWNYHSDVFGLGIKPWFIELNCIGRRSGFDMLPNNNGSTAHDGAVGIRMGGEYYETYGRVVHDVHEGTVTCNFNCTSRDSSREGNYLGGASFAAGQGGVAGKARVYLYNCRHGGPNAGITKDGESEIWLFTTPIGSKGQPRVISPYHFIT
Physico‐chemical
properties
protein length:560 AA
molecular weight: 60672,05620 Da
isoelectric point:5,81528
aromaticity:0,09821
hydropathy:-0,22446

Domains

Domains [InterPro]
DC_1231
ATT
1–206
DC_1231 DC_1219
IPR012334
STR
167–538
IPR012334
IPR011050
STR
172–530
IPR011050
XCO36445.1
1 560
Architecture
ATT
STR
ATT 1-206 | STR 207-550 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36445.1
1 560
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9891
Central domain 197 549 354 0,9331
C-terminal 550 560 10 0,3005
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-549
C-terminal
550-560

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_066006
[NCBI] 		3232180 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36445.1 [NCBI]
Genbank nucleotide accession
PP889450.1 [NCBI]
CDS location
range 38057 -> 39739
strand +
CDS
ATGTTAAACAACCTGAATCAGCCGAAAGGCTCAACAATTGGTGTGCTCAAGGATGGGCGCACCGTCCAACAAGCGTTTGATGAACTGTTTGTCTCACTTAACGGGGTCCTCGTGGCCCCTGACTGGTGGGTTATTCAGGGGACAACCAATGTAGAACTTAACGGAGGGGTGTTCTTGCACGGAGATGCCCGGTTTCAAGGGAAATCCTCGGTAGTACAATTAACATCGTCCACTGTAGCGATTGTTGCCAATAGTGACGGTACGTTCTCCCCTGTAACCTCATACCCAACGGATGGTAAACCAGTTGTTGCACACGTAAGGGAGGGCAGTCTGGCGGAAGTTGTTGGGAGCTTGAATAGGAGTGCATTTATCATGGGGAACGACCCAATAACTATCACGTGGTTACCGTCTGAGCTGGCCAGAATAACTGAGAGATTCAACATTATGAGTTCTTACAGTCCGGCTGGAGGTGTGCAGTTCTATACTGACTACGACATCACTGCCTACCGGGCACCGTCGGACTCTCTAACCTATCATGTGGACATTGTTGCTGGTAGCGATACGTCCGGGGATGGCTCCGTAGATAAACCATTCCAGCGCATAAAGAAAGCTATCGAGCAGAACCCGCCAGCTAGGGTCATCAAGATTAAAGGCGGCCCAACACCATACACTCGCGATTACACGTGGAACGTTTCCATCGTGGACCGGGACGTAGACATTATTGGGTACGGGGACCAGCGCCCGGTGTTATCCGGTGAGGCGGAGTCAGTCACGTTCACCCCAGTCGAAGGTAGACCCGGTGTTTACTCAGCCACTCAGGGCCTTGCATTCAGGATTGTCGATAAGAGTGTTGTCGATAAGTACGGCCATGAGCAGGTACTGACAAACGTCGCGTCTCTCGCTGAAGTAGGTCCGGGTCGTAGCTTCGTCAGCGGGTCGACCATAACGTTCCAACTGAACGACAGTCGAGCACCTGATGCTAACGTTAAGTTGATTCTCCAGATTACCAACGGGCGTGTGCAGGATAACTCCAATGTTTACATCGAGAACGTGGAGTTCCGCTACAGCTTCCGAGGGTTCCACGCTGAGGTTATGGATGCCAGTAAGGCAGGCGCCGTGCTCCGCTTGAACAACTGCAAGTTCGGGCTAACCTGTACTGAAAACTCATTCAACAGCAGGGGATACAACGTTGTTGCCGTTGGTTGTATTGCAGAGTACGGTATGCAGGATGCATGGAACTATCACTCGGACGTGTTCGGCCTAGGCATTAAGCCTTGGTTCATTGAGTTAAACTGTATCGGGAGACGCTCAGGGTTCGACATGCTCCCTAACAATAATGGCTCAACCGCACATGACGGCGCTGTAGGTATTCGAATGGGAGGTGAATACTACGAGACTTACGGCAGGGTGGTACACGATGTTCACGAGGGAACTGTAACATGCAACTTCAACTGTACGTCCCGCGATAGCTCACGTGAGGGTAACTACCTCGGAGGGGCATCATTTGCTGCTGGTCAGGGCGGTGTTGCAGGTAAGGCTCGGGTGTACCTGTACAACTGTCGACACGGTGGACCCAATGCTGGCATTACTAAGGATGGTGAATCTGAGATTTGGTTATTCACAACGCCAATTGGTTCGAAAGGCCAACCTCGGGTAATCAGTCCCTACCACTTCATAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70fd3d77d08a1b24fd20c3046f5c833dd6df123f14314e2c7e612e204f165eed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank