Protein

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Genbank accession
XNL97764.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MSFFAGKYTDGKTVLSLNRASGGDVNVHYSPNTNSIFHSDMPHMFVKRRFQVGLGNAGNGYFTGGLPSDLSYILANRANVVIPVLVVRDNADGTEYYHQMTGIQRNSTYRWQTLYDLISIWGQYTGSIQFDLNLEWGYWKQGAAVWDQIGNHGTGGHIIFDHEGGEDYVADAYYDLAGGWIMYQWRDPQDWYMYTNWIPRAQARPIMNYEDSQNLVNPDYMHPLGPSSSVYDAVYVRAGGARCATGMGDPNAYGNTAYTKVRNLDFPYQIPMAGSSSAYMTAGAERHVANGRMSGFTEVYYPFTPVRMEYLWLNVTFDNYWGYSAENLFTGSDIKIAKDSFIIKGVDLRNTNYEMLAAVSTGTPSISNTYFSSNVFAWSSTEMDDGGAFRFFGANAWGGLKGFTGSNTGSTVGNSTPWNIGLYRLPQNSNIEINSPQNKIAINGVDIWSPNVRPLQLFPQNKANNILLGDNGRLFPMAYGETRLINTVDVGLGGSPEPSTILLSIEWMGNSLCDTDGDVNMQRVGVNAASGAGSGPYVGAARRLVKYDYDAGDGVSHQIVVLHTNTFVPILTTNTISYAGGAAGAPRNKFQYYIRKNASNILEFWVTSRALPMSGLPVSYTPWVQYHRLRLNIQRLT
Physico‐chemical
properties
protein length:637 AA
molecular weight: 70597,06420 Da
isoelectric point:6,06719
aromaticity:0,13187
hydropathy:-0,30361

Domains

Domains [InterPro]
IPR059609
RBD
1–637
IPR059609
XNL97764.1
1 637
Architecture
RBD
RBD 1-637
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL97764.1
1 637
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0186
Central domain 11 423 414 0,9115
C-terminal 424 637 213 0,8826
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-423
C-terminal
424-637

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage CPphiVTCCBPA_418
[NCBI] 		3388351 Viruses >
Host Corynebacterium pseudotuberculosis
[NCBI] 		1719 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL97764.1 [NCBI]
Genbank nucleotide accession
PQ773600 [NCBI]
CDS location
range 813 -> 2726
strand +
CDS
ATGAGCTTCTTCGCAGGAAAGTATACAGATGGAAAAACTGTCCTATCTTTAAATAGGGCAAGTGGAGGAGACGTCAACGTTCATTATAGTCCCAACACAAACTCCATCTTTCACTCAGACATGCCACACATGTTTGTTAAACGCCGTTTCCAGGTGGGTTTAGGGAATGCAGGTAATGGATATTTTACTGGTGGTTTACCTTCAGACCTAAGCTACATTCTAGCTAATAGAGCTAACGTAGTTATACCAGTCCTAGTGGTACGTGATAATGCTGATGGTACTGAGTACTACCATCAAATGACTGGAATCCAGCGTAATAGCACGTATAGATGGCAGACTCTATATGACCTTATTAGTATCTGGGGTCAGTATACTGGTTCTATCCAGTTTGACTTAAACCTCGAATGGGGGTATTGGAAACAAGGTGCAGCTGTATGGGATCAAATTGGAAACCATGGAACTGGTGGTCATATTATATTTGACCATGAAGGTGGTGAAGACTACGTTGCAGATGCATACTATGATTTAGCAGGTGGCTGGATTATGTATCAGTGGCGTGATCCACAGGATTGGTACATGTATACCAACTGGATACCACGTGCTCAAGCTCGTCCTATCATGAACTATGAGGATAGCCAGAACTTAGTAAACCCTGACTATATGCATCCACTCGGACCTTCTAGTAGTGTTTATGATGCTGTGTATGTGCGTGCCGGTGGTGCAAGGTGTGCAACTGGTATGGGTGATCCTAATGCATATGGTAACACTGCGTATACTAAAGTTCGTAACCTTGACTTCCCTTACCAGATTCCAATGGCAGGGTCTAGTTCTGCTTATATGACAGCGGGTGCTGAACGTCACGTTGCTAATGGACGTATGTCTGGATTTACTGAGGTTTACTATCCGTTTACTCCAGTACGTATGGAATACTTGTGGTTGAACGTTACGTTTGATAACTACTGGGGTTACTCAGCTGAGAACCTATTTACTGGTAGTGATATCAAGATTGCAAAAGATTCCTTTATTATTAAAGGTGTCGATTTAAGAAATACTAACTATGAAATGTTGGCTGCTGTAAGTACTGGTACTCCTAGTATTAGTAATACTTACTTTTCTAGTAATGTGTTTGCCTGGTCATCTACAGAGATGGACGATGGGGGTGCTTTCAGATTCTTCGGAGCTAATGCCTGGGGTGGTTTGAAAGGATTTACAGGTAGTAACACAGGTAGTACAGTTGGTAACTCCACGCCGTGGAATATTGGTCTGTATAGACTTCCACAAAATAGTAATATCGAGATAAACTCTCCACAAAATAAGATTGCTATTAATGGTGTTGATATCTGGAGTCCTAATGTACGTCCACTACAGCTATTTCCACAGAATAAGGCAAACAACATTCTGTTGGGAGATAACGGTAGGTTATTCCCTATGGCTTATGGTGAAACTCGATTAATCAACACAGTTGACGTTGGTTTAGGGGGTAGTCCAGAGCCTTCAACGATTCTCCTAAGTATTGAGTGGATGGGTAATTCTCTATGCGATACTGATGGGGATGTGAATATGCAACGTGTTGGAGTTAACGCTGCTAGTGGTGCTGGTAGTGGTCCTTACGTAGGTGCTGCCAGACGTTTAGTTAAATATGATTATGATGCAGGTGATGGTGTTTCTCACCAAATCGTAGTATTACACACTAACACGTTTGTTCCAATTTTAACAACTAATACTATTTCGTATGCTGGCGGTGCTGCCGGTGCCCCACGAAATAAATTCCAATACTATATCAGAAAGAACGCTTCTAATATTCTAGAGTTTTGGGTAACTTCTAGGGCATTACCAATGAGCGGTTTACCTGTTTCATATACTCCGTGGGTTCAATACCACAGACTAAGACTTAACATTCAGAGGTTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0279cf9a48b62fd4acbe728c7959deef7c50ec0568f7605fd9372e07e1f68988
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50