Protein

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Genbank accession
WPJ70619.1 [GenBank]
Protein name
tail tubular protein or DNA ejection
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRNPERGQEITIPLLYGDGRRSNTLDWSTRLPENMLAVSRNIKGGNGYMRIMPGITKRGDDVAGVSRGADWNTVKGQTYRVMGQSLYLDGEVVTDITGVDRTPMAHSRDRVAIVTENRMIMIGYDGSRTAFSNWPTSDDDPIAQYNWGDINDVCHLRQRFIFSTKGTDTFWISDLDDETHPDKTAPAYRAESMPDGIVAIRSWRDYVVCFGSASIEFFGLTGDDQNVYANQPSYTIDAGTIGRESVCEYLESFAFLVSPFSGDLSIGLMNPGGGSWSELASVEVKKILMGYTVEELADVRLESLTFETHKLLIVHLPDYTLVYDHPVSQAQGVPVWSYIKTGINGIKPHRAIDYVNEGKVITCGDKVEPWLGQLDHTTSAQYGEDQEIVLYTPLLWAENAILADFRMDASTGGDSVASRIWLSATEDGIVYGQEKSIDYNKPFHWLQNVILRVVGRVRSAIGFKIRTVGATPATLSRARVRVT
Physico‐chemical
properties
protein length:483 AA
molecular weight: 53753,87190 Da
isoelectric point:5,12775
aromaticity:0,09524
hydropathy:-0,27453

Domains

Domains [InterPro]
IPR021098
STR
11–482
IPR021098
WPJ70619.1
1 483
Architecture
STR
STR 11-482 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ70619.1
1 483
Domain Start End Length (AA) Confidence
N-terminal 1 345 345 0,8377
Central domain 346 472 128 0,2614
C-terminal 473 483 10 0,9910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-345
Central
346-472
C-terminal
473-483

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB-Eco-KMB41
[NCBI] 		3092602 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ70619.1 [NCBI]
Genbank nucleotide accession
OR539216 [NCBI]
CDS location
range 22301 -> 23752
strand -
CDS
ATGAGGAACCCAGAACGCGGGCAGGAGATCACGATCCCCTTGCTCTATGGCGACGGACGTCGCTCCAACACGCTCGACTGGTCAACGCGGCTACCGGAGAACATGCTCGCCGTGAGCCGCAACATCAAGGGCGGCAACGGCTATATGCGCATCATGCCGGGCATTACGAAGCGCGGGGACGACGTGGCGGGCGTAAGCCGTGGCGCTGACTGGAACACGGTCAAAGGCCAGACTTACCGCGTCATGGGCCAGTCCCTTTATCTGGACGGCGAAGTGGTGACGGATATCACGGGCGTAGACCGTACCCCGATGGCGCATAGCCGGGACCGCGTGGCGATCGTGACCGAGAACAGGATGATCATGATCGGCTACGACGGGAGCCGGACGGCGTTCTCCAACTGGCCCACGTCGGACGACGACCCGATCGCACAATACAACTGGGGCGACATTAACGACGTGTGCCACCTCCGCCAGCGCTTTATTTTCTCCACGAAGGGGACGGACACCTTTTGGATCTCCGACCTGGACGACGAGACGCACCCGGACAAGACGGCCCCGGCGTATCGTGCCGAGTCCATGCCGGACGGCATCGTGGCGATCCGCTCGTGGCGTGATTATGTCGTTTGCTTCGGTAGCGCCTCGATCGAGTTCTTCGGCCTGACTGGTGACGATCAGAACGTCTACGCGAACCAGCCCTCCTACACCATCGACGCCGGGACGATCGGGCGTGAAAGCGTGTGCGAGTATCTGGAGTCCTTCGCGTTCCTCGTCTCCCCGTTCTCCGGCGACCTCTCGATCGGCCTCATGAACCCCGGCGGCGGATCGTGGTCCGAACTGGCGAGCGTGGAAGTTAAGAAGATCCTCATGGGTTACACCGTGGAGGAACTGGCGGACGTCCGACTGGAGTCACTGACCTTTGAAACGCACAAATTGCTTATTGTCCACCTCCCGGACTACACGCTGGTTTACGATCACCCGGTTAGCCAGGCGCAGGGCGTCCCGGTCTGGTCGTACATCAAAACGGGTATTAACGGCATCAAGCCGCACCGCGCGATCGACTACGTGAACGAGGGCAAGGTGATCACCTGTGGCGACAAGGTGGAGCCGTGGCTGGGCCAGCTTGACCACACGACCAGCGCTCAATATGGCGAGGACCAGGAGATCGTCCTGTATACGCCTTTGCTGTGGGCCGAGAATGCGATCCTTGCTGACTTCCGCATGGACGCCAGCACCGGGGGCGACTCCGTGGCGAGCCGGATCTGGCTCTCCGCTACCGAGGACGGGATCGTGTACGGGCAGGAGAAAAGCATCGACTATAACAAGCCTTTCCACTGGCTCCAGAACGTTATCTTACGCGTCGTGGGCCGAGTCCGGTCCGCTATTGGCTTCAAAATTCGCACCGTAGGCGCAACCCCGGCGACTCTCTCGCGGGCGCGTGTCCGTGTGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d4ebc89ccdd04f43f56fd68cb907bf1b6152785be2f2db79eb7b58f981ce60a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8377
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50