Protein

View in Explore
Genbank accession
XCO41094.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSHNPFDTGGSGCTNDFRSADQLVDRIIGDAYHVVKEVYLALGNLSYIYNYLQKYGLIITVDSEDAIKDIPLSIGKFARIYSKSDTSGYYFTDYLYVADDTTGIPSNDPSATGSWISTKATGSNASFVRIWKYRAVTDGETVIQLPTDMPIVDVQTIYVQGSRQDVGEGFVYNEGDATLTLADELDAGNLVTVIIGISDPDMDIDIFALLKKEDGASQIGTLTGETVQDVLTSLREEHQQLEENLVANTGASGIGTLQGIPLQDLLSWATPQAFGAKGNGISDDTDALYAAFKSTYETIHVPKGTYLITRKLKCALTKNLRVICAPGVVFKLADNVRKNMMVFVGDRTHNFEWFGGEFDGNWAGQGEETLNSSGSFNDMSHGFIVSLFNEVRLDTMYVHSFRGHSMNHAGNKKLHASNLRFNSHIAQAFPQGGSRGDGITGCSEDVLIENVYGFTTDDMVAVFAGILWVEGGTEADSAMVTNLDYLTCKSVTIRNVNPWYKTSDIDPNTTVYTWNGVVVGGQGGIGVEKVHISNVKGYTQYSGVRVGASDPVGSAPATDYWNTMGSVIIDDISVRVAGTSTNQHLYNPIRIGSLTAASTGEAHTCLINSLVLSNIQLWPTGNNRTLIGIGYTTIYNLDINSISIRGNYADDTYYAIHCAGDRQIAQVSINGVTHNPPSTSSDAIAQAQLILYWAVTYSSTAAKISFSGVPARRSSDGSSYLPNLFIANGSVAPYVYGFDAVIRASNNFHSLPRVKGIYCTDRYLGRVRVSPNTGLWEFLDYATTYESSTFGKPSASTFSNYSLITWLPGMVVKCVGSPNESIDSWVYNSNGDWQMQGKTVTNNMVSLITVSSTPSIIAPYAMMTSPVYNDATWPESYGAVVLYGGHQNLRAGAYEDFVSTTGNTYRRTWNTNTSAWNSWYRLPRVVDVPASATASGVAGNIAISSTHLYVCVATNTWVRTALATW
Physico‐chemical
properties
protein length:966 AA
molecular weight: 104934,85250 Da
isoelectric point:5,10382
aromaticity:0,10455
hydropathy:-0,12692

Domains

Domains [InterPro]
DC_0116
ATT
55–361
DC_0116 DC_0574
Coil
Unmapped
225–252
Coil IPR011050
IPR012334
STR
268–721
IPR012334
IPR024535
ENZ
275–351
IPR024535
XCO41094.1
1 966
Architecture
ATT
STR
RBD
ATT 55-361 | STR 362-721 | RBD 722-966
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41094.1
1 966
Domain Start End Length (AA) Confidence
N-terminal 1 284 284 0,9916
Central domain 285 765 482 0,9810
C-terminal 766 966 200 0,9750
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-284
Central
285-765
C-terminal
766-966

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146050
[NCBI] 		3232229 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41094.1 [NCBI]
Genbank nucleotide accession
PP889499 [NCBI]
CDS location
range 2310 -> 5210
strand +
CDS
ATGAATTCTCATAATCCGTTTGACACAGGTGGTAGTGGGTGCACCAATGATTTTCGTTCTGCTGACCAGTTAGTAGACCGCATCATTGGGGATGCTTACCACGTAGTAAAAGAGGTTTACCTTGCGTTGGGTAATCTCTCCTACATCTATAACTACCTACAGAAGTATGGTCTGATTATTACTGTAGATAGCGAGGATGCAATCAAGGATATCCCATTATCAATTGGGAAGTTTGCTCGTATATATAGCAAATCAGATACGTCTGGTTACTACTTTACTGATTACCTCTATGTAGCCGATGACACAACAGGCATACCATCCAATGACCCATCCGCAACTGGTTCCTGGATTAGTACAAAAGCTACTGGTTCCAATGCATCTTTTGTGCGTATCTGGAAGTATCGTGCTGTTACTGATGGCGAGACGGTAATTCAGCTACCAACTGATATGCCTATTGTGGATGTACAAACTATTTATGTACAAGGTAGTCGTCAGGACGTTGGTGAAGGTTTCGTCTATAACGAAGGTGATGCAACCTTAACCCTGGCTGATGAACTTGATGCTGGTAACTTAGTTACTGTTATCATTGGTATCTCTGACCCAGACATGGATATTGATATCTTTGCTCTGTTAAAGAAAGAGGACGGGGCTTCCCAGATAGGTACCCTTACTGGTGAGACTGTACAAGATGTACTTACTTCTCTACGTGAAGAGCACCAGCAGTTAGAAGAAAATCTTGTTGCCAATACTGGAGCATCTGGCATAGGTACTTTACAGGGTATTCCTTTGCAGGATTTATTATCATGGGCTACCCCACAAGCTTTTGGGGCTAAGGGTAATGGTATCTCAGATGATACTGACGCTTTATACGCAGCATTCAAGTCTACGTATGAAACTATCCATGTACCCAAAGGAACCTACTTAATTACCCGTAAGTTAAAGTGTGCGTTAACTAAAAACCTGCGTGTTATCTGTGCTCCAGGTGTTGTGTTTAAACTGGCAGATAATGTCCGAAAAAACATGATGGTCTTTGTTGGGGACCGTACCCACAACTTTGAATGGTTTGGCGGTGAGTTCGATGGTAACTGGGCTGGACAAGGCGAAGAGACCTTAAACAGTTCCGGTTCCTTCAATGACATGTCCCATGGGTTTATTGTAAGCCTCTTCAATGAAGTGCGTTTAGATACTATGTACGTTCATAGTTTCCGTGGGCACTCAATGAACCACGCTGGTAACAAAAAGTTACACGCTTCCAATCTGAGATTTAATTCTCACATTGCCCAGGCTTTCCCACAAGGTGGGTCCCGTGGTGATGGTATTACTGGTTGCTCAGAAGACGTACTCATTGAGAACGTTTATGGCTTTACCACTGACGACATGGTAGCAGTCTTTGCTGGTATCCTTTGGGTTGAGGGGGGTACTGAAGCAGACTCTGCTATGGTAACGAATTTAGACTACCTAACCTGTAAGTCAGTAACTATCCGTAATGTTAATCCTTGGTATAAAACCAGTGATATTGACCCGAATACTACCGTCTATACGTGGAATGGTGTAGTTGTTGGCGGTCAAGGTGGCATTGGTGTAGAGAAGGTACACATTAGCAATGTTAAAGGGTATACCCAGTATAGTGGTGTTCGAGTAGGTGCTTCTGACCCAGTAGGTTCAGCTCCTGCTACAGACTACTGGAATACTATGGGTAGTGTAATCATTGATGATATTAGCGTAAGGGTTGCTGGTACCTCTACTAACCAACACCTTTATAACCCTATTCGTATTGGTTCCCTGACAGCGGCAAGTACAGGCGAGGCACATACCTGCCTTATTAATTCCCTTGTTTTATCCAATATTCAACTCTGGCCTACTGGCAATAACCGGACTCTCATTGGTATTGGGTATACTACGATTTATAACCTGGATATCAATAGTATTAGCATTCGTGGTAACTATGCTGATGATACTTACTATGCTATTCACTGTGCTGGGGACCGTCAGATTGCACAGGTTAGTATCAATGGTGTTACCCATAACCCACCAAGCACCTCTAGTGATGCTATTGCGCAGGCCCAGCTTATTCTGTATTGGGCGGTTACTTACTCAAGTACGGCAGCTAAGATTAGTTTTTCTGGTGTTCCTGCTAGAAGGTCATCAGACGGTTCGTCTTATCTCCCTAACCTATTCATAGCAAATGGTTCGGTAGCTCCATATGTGTATGGTTTTGACGCTGTAATCCGTGCATCTAATAACTTCCACTCTTTACCCCGTGTTAAAGGTATTTACTGTACTGACCGGTATTTAGGCCGGGTACGAGTCTCCCCAAACACTGGGTTATGGGAATTTTTAGACTATGCCACTACGTATGAAAGTAGTACTTTTGGTAAACCTTCTGCGAGTACATTCAGTAACTATAGTTTGATTACATGGTTACCTGGGATGGTTGTTAAGTGTGTGGGTTCCCCTAATGAGTCTATTGATTCATGGGTGTATAACTCCAATGGTGATTGGCAGATGCAGGGTAAGACTGTAACCAATAACATGGTTTCTCTTATCACAGTCTCATCTACACCATCTATCATAGCACCCTATGCTATGATGACTTCGCCTGTTTATAATGATGCTACATGGCCAGAATCTTATGGTGCTGTTGTATTGTATGGTGGGCACCAGAACTTACGTGCTGGGGCATATGAAGACTTTGTATCGACTACTGGTAATACCTATAGAAGAACTTGGAACACTAATACTTCAGCATGGAATAGTTGGTACAGGTTACCTCGTGTAGTTGATGTACCTGCCTCAGCTACTGCATCTGGGGTTGCTGGAAATATTGCAATATCTTCCACGCATCTTTATGTGTGTGTTGCAACAAATACCTGGGTTCGCACAGCTCTAGCAACCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b49cc21fd1a232a574186984a9f4f5594818983d433d268769cba1f46562b8cb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank