Protein

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Genbank accession
XCD05765.1 [GenBank]
Protein name
tail collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MQPYSAAKQWNDGFGANETRITAADLTHIEAGISAATQGVTNVETRLQSTITDQAKKAEDLRKEILAAAQALIPIGTILMFGGNSDPAGWVRCDGRLLERAGNAKLFAAIGTIYGSTTSANFRVPDFRDRFPAGAGTTYNPGAVGGLATVALTEAQMPRHAHEIGEATDSARRFEARTANQDIGIGSGGYTYLTSVGNNSNPRRPFANFVGSSQAHENRPPYLAVPFIIKVS
Physico‐chemical
properties
protein length:232 AA
molecular weight: 24627,19790 Da
isoelectric point:7,89346
aromaticity:0,07759
hydropathy:-0,28103

Domains

Domains [InterPro]
DC_1651
STR
4–232
DC_1651
IPR037053
ATT
66–128
IPR037053
cd22641
STR
68–231
cd22641
SSF88874
STR
71–231
SSF88874
IPR011083
ATT
76–132
IPR011083
XCD05765.1
1 232
Architecture
STR
ATT
STR
STR 4-65 | ATT 66-132 | STR 133-232
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 38
[NCBI] 		3145756 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD05765.1 [NCBI]
Genbank nucleotide accession
PP511596 [NCBI]
CDS location
range 26684 -> 27382
strand +
CDS
GTGCAGCCGTACAGCGCAGCGAAACAGTGGAACGATGGGTTCGGCGCTAACGAGACCCGTATCACCGCTGCCGACCTCACTCACATCGAGGCGGGCATCTCAGCCGCCACGCAGGGCGTTACGAACGTCGAGACCCGCCTACAGTCGACTATCACCGACCAGGCCAAGAAGGCCGAGGACCTCCGCAAGGAGATTCTTGCGGCTGCCCAGGCCCTGATCCCGATCGGCACCATCCTCATGTTCGGAGGAAACTCGGACCCCGCAGGGTGGGTACGCTGCGACGGCAGGCTGCTGGAGCGGGCGGGCAACGCCAAGCTGTTCGCGGCCATCGGCACCATCTACGGATCGACAACCTCCGCCAACTTCCGCGTGCCGGACTTCCGAGATCGGTTCCCCGCAGGAGCCGGTACCACCTATAACCCCGGCGCTGTCGGCGGCCTGGCGACGGTCGCGCTCACTGAGGCTCAGATGCCTCGGCACGCCCACGAGATCGGTGAGGCCACGGACTCCGCCCGCCGCTTCGAGGCCCGCACCGCGAACCAGGACATCGGTATTGGCTCCGGCGGCTACACCTACCTGACCTCGGTCGGAAACAACTCCAACCCCCGGCGGCCTTTCGCCAACTTCGTCGGGAGCAGCCAGGCCCACGAGAACCGGCCCCCGTACCTGGCCGTGCCGTTCATCATTAAGGTGTCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b3f716f30781a523c48d765f3ae795d3e70674bdf95dd623b1d76467efa7bcb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7934
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank