Protein

View in Explore
Genbank accession
XCO39579.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQEIKTVIQYPTGDTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVEATGFDRVEIRRFTSASERIVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDVGNLDARNRRIVRLAPGIDGTDAINKNQLDTTLGEAGGILSEVKAEKQDFYKYLEKFADDSALVRGVSWVYNSGSALGGETAIVINKPTDVFAVPYIEINGDRQEVGYHYDFDASTQTITLTKPLVAGDYLMAMTTESHIPLESLLAGTTGATSVGTKDGTTVQDVLNRIDARLGRTEDVLAYRETSILEYMNETDVAAILTNTGTVDVNYALKAAVNAGERALLFPVVRGTYGLGSSVPANMVQFPIGMRLRGLSWKPYTYANQASLNDTMSTIRVNSGAPAPFYGAKRMTLRDLNFDGRDRTTQLLYSPNSSEQFNGTRIEGCGIYSFNYGLGWSNYVGTLFCFRVSVTNCNDAVRNPIDSSFIGCVFNANNRGVNLQSGANNNAFIGCRNEWNNGDNYFAFNAVENIIIGELCDRAGRGGVVASGSASWYLNGVVVRRSGANQDLGTDYSANFVIIDSGIIVLNGCRTAVGANDSGDGGEVTPSFLLSTLGSGGGTFIAAGSDLSGYRTKSHNEKGRTNLVVTGCLGFATIVNVGKSLIIDGRACTGFNRGNLQDGVGATLTLAVGTTPPDQYETHPLRTLLVETRLPDGRDEHLMVPLIFQSELSISVRAWAARVASTSTRIGITEEASGVVVSFSVSPDGNSLNVVLTSKDGISRKVRATLLPN
Physico‐chemical
properties
protein length:790 AA
molecular weight: 85289,57290 Da
isoelectric point:5,19346
aromaticity:0,07975
hydropathy:-0,14215

Domains

Domains [InterPro]
DC_0778
STR
1–517
DC_0778
IPR005604
ATT
2–127
IPR005604 DC_0770
XCO39579.1
1 790
Architecture
ATT
STR
ATT 1-127 | STR 128-684 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39579.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 327 327 0,9931
Central domain 328 672 346 0,9913
C-terminal 673 790 117 0,9818
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-327
Central
328-672
C-terminal
673-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146031
[NCBI] 		3232211 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39579.1 [NCBI]
Genbank nucleotide accession
PP889481.1 [NCBI]
CDS location
range 35730 -> 38102
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTACCCCACAGGGGACACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTGTCGGACGATAACCGCAGACTGTTGAGCAACATCACCGAGTACCGCTACGTGTCCAAGACCAGAGTTAAGCTGCTTGTGGAAGCTACTGGGTTCGACCGTGTGGAAATCCGTCGATTCACTTCCGCGTCGGAACGCATCGTAGACTTCAGTGATGGCTCTGTGCTCCGCGCTGCTGACCTTAACGTATCTCAAATACAGTCGGCACATATCGCAGAAGAAGCACGAGATGCGGCGCTTATGGCAATGCCACAGGATGATGTGGGTAACCTTGATGCTCGTAATCGTAGAATCGTACGGTTGGCTCCGGGTATTGATGGTACGGATGCAATCAACAAGAACCAGCTGGACACGACTTTGGGCGAGGCTGGTGGTATCCTCTCAGAAGTCAAGGCCGAAAAGCAAGACTTCTACAAGTACCTTGAGAAGTTCGCAGACGACTCAGCTCTGGTTCGTGGGGTATCTTGGGTGTATAACTCTGGGTCGGCTTTAGGTGGTGAAACAGCCATTGTTATTAACAAGCCGACAGACGTGTTCGCGGTTCCCTACATTGAGATTAATGGCGACCGTCAAGAAGTTGGATACCACTATGACTTCGACGCAAGCACCCAGACGATAACGTTGACCAAACCGTTGGTGGCTGGGGATTATCTTATGGCAATGACCACTGAGTCCCACATTCCTCTTGAGTCCTTACTTGCCGGTACAACAGGCGCCACTAGCGTAGGTACGAAGGACGGCACCACCGTTCAGGATGTCCTCAATCGCATTGATGCCAGACTGGGGCGCACAGAAGACGTACTAGCGTACCGTGAGACCTCAATCTTAGAGTACATGAACGAAACCGACGTGGCTGCCATCCTTACGAACACAGGTACTGTTGACGTGAACTATGCCCTAAAGGCGGCTGTTAACGCTGGAGAAAGAGCACTCCTGTTCCCTGTGGTAAGAGGGACATACGGGCTAGGGTCTTCCGTACCAGCTAACATGGTGCAATTCCCCATCGGTATGAGACTGCGTGGTTTATCTTGGAAGCCGTACACCTACGCCAACCAAGCATCACTCAACGACACCATGTCTACAATCCGTGTAAACAGCGGGGCACCAGCTCCGTTCTACGGTGCGAAGCGAATGACGTTACGTGACTTGAACTTTGATGGCCGCGACCGGACCACCCAACTCCTGTACTCTCCGAACTCCTCTGAGCAGTTCAACGGGACGAGAATTGAAGGTTGTGGAATATACAGTTTCAACTACGGTTTGGGCTGGTCAAACTATGTTGGTACCCTATTCTGCTTCAGGGTTTCAGTCACCAACTGTAACGATGCGGTACGAAACCCGATAGATTCAAGTTTCATTGGGTGTGTGTTTAATGCGAACAACAGGGGTGTGAACCTCCAGTCAGGGGCCAACAATAACGCATTCATTGGGTGCCGAAATGAATGGAACAATGGGGATAACTACTTCGCCTTTAACGCGGTGGAGAACATCATCATCGGAGAACTTTGCGACAGGGCAGGTCGCGGTGGTGTGGTTGCCTCCGGGTCTGCGAGTTGGTACCTCAATGGTGTCGTTGTGCGGCGCTCTGGGGCAAACCAAGACCTAGGTACAGACTACTCTGCAAACTTTGTGATTATCGACTCTGGCATCATTGTACTCAATGGGTGCCGTACAGCAGTCGGGGCGAATGACTCCGGGGATGGTGGTGAAGTTACTCCAAGTTTCCTGCTGTCCACCTTGGGTAGTGGCGGAGGTACCTTCATTGCCGCAGGTTCGGACCTTTCTGGTTACCGAACCAAGAGTCACAATGAGAAGGGTCGTACCAACCTAGTAGTCACCGGGTGCCTTGGGTTCGCCACTATTGTGAACGTTGGGAAGTCACTTATTATTGACGGTCGTGCCTGTACAGGGTTCAATCGAGGAAATCTTCAGGATGGCGTGGGTGCTACTTTGACACTAGCTGTTGGTACTACCCCACCAGACCAGTACGAGACACACCCGCTGCGCACGTTGCTTGTGGAGACTCGTCTGCCGGATGGTCGAGATGAGCACCTGATGGTCCCTCTGATATTCCAGAGCGAGCTGTCAATTAGTGTCAGGGCATGGGCTGCACGAGTTGCTTCGACAAGTACCCGTATAGGGATTACTGAAGAGGCCTCGGGAGTAGTGGTGTCTTTCTCCGTAAGTCCTGACGGTAATTCGTTAAACGTTGTACTAACCAGTAAGGACGGAATCTCTCGTAAAGTCCGTGCAACACTTCTGCCCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a0e48ac1bd296c7dad740ec9e3873426e8586ff8b773160f5b49e85159d49f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank