Protein

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UniProt accession
A0A8S5NL60 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MVLVVNDPTVGDIREIEEFELDIAFGSDENALKLEARADEAPEEGQFVFIDGTEYGGVIDQASYEAGREASGSILCKGRTWHGILAGKRLLPDLGSGYLSVSGKASDVLAPLIERMGLSGLFSAASDDTSVSYTFDRFVDGYSGLKAMAKANGRKVVMRRKGGKVEISLPPVVDYANKVDSDLLDFTLTSVHRCINHLVCVGTGELENRAVVHFYADTAGNVSHTQSLFGVDEICALYDYSNADEAKLEEEGGKKLREYQTRGSVEVDAHDDIDVDVGDIISARDNAHGKTVSAIVVKKIVQVSHGVATYRYEVGSETTTKNSASAIADGGGGHAYLAGKGLKLENYTFSAEVDAESLKAVEAKADKAVTDASNSLQTWAQADIAMGEVSTLTEGSKATASLSGEGLVKTLSLGIPRGATGIQGPRGERGPQGIQGETGPRGPQGVQGAQGPKGDTGEGFSISKVYTSYEAMHAGWKVDGVAVGGFAIISSNVEDPHNAELYVKSADGYSLIADMSGATGVKGEQGPMGPQGPVGATGAAGSTGPQGPKGATGATGPQGPTGATGATGATGAKGATGPTGPQGVKGEQGERGPQGIQGPKGEKGERGDSGVTVPLSGFFSLTVDSDGNLWSHVADGAAAPPLSYDSSTGELYYEIGE
Physico‐chemical
properties
protein length:657 AA
molecular weight: 67642,89800 Da
isoelectric point:4,78456
aromaticity:0,06088
hydropathy:-0,30076

Domains

Domains [InterPro]
DC_0791
STR
257–515
DC_0791 IPR008160
IPR050149
Unmapped
417–612
IPR050149
G3DSA:1.20.5.320
STR
430–475
G3DSA:1.20.5.320
DC_0341
STR
474–650
DC_0341
A0A8S5NL60
1 657
Architecture
STR
STR 257-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctFbs2
[NCBI] 		2826213 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD95478.1 [NCBI]
Genbank nucleotide accession
BK015193 [NCBI]
CDS location
range 22303 -> 24276
strand -
CDS
ATGGTTTTAGTGGTGAATGATCCAACTGTTGGCGATATCCGCGAAATCGAGGAATTCGAGCTTGACATAGCTTTCGGCAGCGACGAGAACGCACTGAAATTGGAGGCCCGCGCGGACGAAGCCCCCGAAGAGGGGCAATTTGTGTTCATCGACGGCACCGAGTATGGTGGTGTTATCGACCAGGCGAGCTATGAGGCCGGCAGGGAGGCATCCGGCTCAATTCTGTGCAAGGGCCGCACCTGGCATGGTATTTTGGCAGGCAAGCGCCTGCTCCCCGATTTGGGAAGCGGATACCTTTCCGTCAGCGGTAAGGCGAGCGATGTGCTCGCGCCGCTCATCGAGCGCATGGGGCTTTCTGGGCTGTTCTCCGCCGCTTCCGACGATACGTCGGTAAGCTACACCTTCGATCGATTCGTGGACGGCTACAGCGGCTTGAAAGCCATGGCGAAGGCCAATGGTCGCAAGGTCGTCATGCGTCGTAAGGGCGGTAAGGTAGAAATCTCTCTGCCGCCTGTCGTAGACTATGCGAACAAGGTCGATTCCGACCTTTTGGACTTCACGCTGACTTCGGTTCACCGCTGTATCAATCACCTGGTCTGCGTAGGTACTGGCGAGCTCGAGAACCGCGCCGTAGTCCATTTCTATGCTGACACTGCCGGTAACGTCAGCCATACCCAGAGCCTCTTTGGAGTCGACGAGATATGTGCGCTCTACGACTACAGCAACGCCGACGAGGCGAAGCTCGAGGAGGAGGGCGGCAAGAAGCTCAGGGAGTACCAGACTCGAGGCAGCGTCGAGGTCGACGCGCACGACGATATCGACGTCGACGTCGGCGACATTATCTCGGCGCGCGATAACGCACATGGTAAGACCGTTAGCGCGATCGTGGTGAAGAAGATCGTACAGGTCTCACATGGCGTGGCAACATACAGGTACGAGGTCGGCAGTGAGACCACGACGAAGAACTCAGCCAGCGCGATCGCCGACGGAGGTGGCGGGCACGCTTATTTGGCGGGAAAGGGCCTGAAGCTCGAGAACTACACGTTCAGTGCGGAGGTCGACGCGGAATCGCTCAAGGCCGTTGAGGCCAAGGCCGACAAGGCCGTAACAGACGCCTCAAACTCGCTCCAGACGTGGGCGCAGGCGGATATCGCCATGGGAGAAGTGTCTACGCTCACGGAAGGCTCTAAGGCCACCGCGTCGCTCTCAGGCGAGGGGCTGGTCAAGACGCTCTCGCTCGGTATCCCACGTGGCGCGACCGGTATTCAGGGTCCGAGAGGCGAGCGCGGCCCGCAGGGTATACAGGGCGAGACCGGCCCACGTGGCCCGCAAGGTGTGCAGGGTGCCCAGGGCCCGAAGGGCGATACCGGCGAGGGTTTTTCCATCTCGAAGGTTTACACCAGCTACGAGGCAATGCATGCTGGGTGGAAGGTCGATGGTGTGGCAGTCGGCGGCTTCGCGATAATCAGCTCGAATGTCGAGGATCCGCACAACGCCGAGCTGTACGTGAAGTCAGCTGATGGCTACTCACTCATCGCTGATATGAGTGGCGCGACCGGCGTCAAAGGCGAGCAGGGCCCGATGGGTCCGCAGGGTCCGGTCGGCGCGACCGGAGCGGCGGGTTCCACGGGGCCGCAGGGCCCCAAGGGAGCCACGGGCGCGACCGGCCCACAGGGTCCGACAGGCGCCACTGGGGCGACCGGCGCGACCGGCGCGAAGGGCGCGACCGGCCCAACGGGGCCACAGGGTGTGAAGGGCGAGCAAGGCGAGCGCGGCCCGCAGGGCATTCAGGGGCCGAAAGGTGAGAAGGGGGAGCGCGGCGACTCTGGCGTCACCGTACCGCTGTCGGGGTTCTTCTCGCTGACGGTCGATTCTGACGGCAACCTTTGGTCGCACGTGGCAGACGGGGCGGCAGCCCCGCCGCTCTCATACGACTCGTCTACGGGTGAGCTTTACTACGAGATAGGTGAGTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
77a6eaa962d5463354b269368993fde5b5f857bf19930b12f5819d9835b1aa53
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7442
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50