Protein

View in Explore
Genbank accession
QBX27293.1 [GenBank]
Protein name
endopeptidase
RBP type
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MITFYDETGKGYGAQVELKTKNAVNGERSISGTIVSNKQVLSRLDRGWSFTFDGELYKIIYAKPKDEGKNISLSFDAVHQFFYDFEHSNCYKEFNGSNRFEVYIEAIFKDSGYRYVIEAETKAIRKENFGNAKRLKMFKEIIKAAGLEFSVTGKVVRILKKVGTDLSTVVRKNFNMNELTIEKNIGNFITYKKGLGAWKDENNHDAGRYTSEYESPLARIYGRIEGEPVSDERYKETGKLLERLKKEVDESYSISVQLGMEDLTQAGYKYTRPRAGDYIMAINETIGFREKIRIVSYESSYDVTGRLLSHKVTCNDIGTVQKAITSEGSIMRSVSESKEYAEGALEVATRALVSANGKNTNYYGATKPKDEPRGTLHEGDLLYLTVGEETELYYWSGTEWLPKILKVDTTKLEKLFNDTQVSTNQAIAQANAKAEDALKKAGTLPDTPTLSEQIKQQILSSPDLNRKVTETLNQTDGGVIYNKIYQNIKTDFVEQNDINQVLTSFSEELQAQVVEFNKLTESNKLYERIIGKSETDAPDKLSRLVMGSQIFQTEVGQYVNTNGANLLNGSKGPFKPDKKPANFDNNILYKGNTSIYMEQGQEYIVSAKTDGNFTAHHDGLKESDNVVLWIMDKDVRNYQIVSDLKTGTTGTKITWNKPTGTYHLRVNTYSKDPDKLKSVWDVKVEKGSIKSDYTLSLTDQLKADPLIEATRTQMSLLAGSWAVKNLNSNGDVLNSINVLADGTNRFDGRLTHITGRTVIDEAVIDGASIKSLSASKLSGGEADFAKMNVVNFDAKNVTSGTFTGLTFRGGLIEGLNGKMNIDLQNSQINILDNDAGINRQKGGFPFQFIRMINDTQITNRGPKNSTLTILGSNRDGTGMSHNSGFAGFRSYNSATDSLSEIVGDQVLIMTNNSKRSPWIFKAADYTDNHHRLIPSNENGTRHSIGRSDRRLGEIHVDEIYINGVRLKMALKDMLNRMGYRGTGNWGDNVN
Physico‐chemical
properties
protein length:990 AA
molecular weight: 110659,87960 Da
isoelectric point:7,23784
aromaticity:0,08687
hydropathy:-0,57020

Domains

Domains [InterPro]
DC_0366
ATT
1–78
DC_0366 G3DSA:3.55.50.40 IPR012892
IPR010572
ENZ
88–299
IPR010572
DC_1418
STR
153–971
DC_1418
QBX27293.1
1 990
Architecture
ATT
STR
ATT 1-78 | STR 79-971 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan380
[NCBI] 		2548137 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parasanguinis
[NCBI] 		1318 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27293.1 [NCBI]
Genbank nucleotide accession
MK448923 [NCBI]
CDS location
range 34066 -> 37038
strand +
CDS
TTGATTACTTTTTACGACGAAACGGGCAAAGGATACGGAGCCCAAGTCGAGCTAAAAACTAAAAACGCGGTAAATGGTGAGCGATCGATCTCGGGAACAATTGTATCTAATAAGCAAGTTCTTTCACGACTCGATCGTGGGTGGAGTTTTACTTTCGATGGAGAACTCTATAAGATTATTTACGCTAAACCTAAAGACGAAGGTAAAAACATTTCGCTATCGTTTGACGCGGTCCACCAGTTCTTCTACGATTTCGAGCACTCAAACTGTTATAAAGAATTTAACGGCTCGAATCGCTTCGAAGTCTATATCGAGGCTATCTTCAAAGATAGTGGCTATCGGTACGTTATCGAGGCGGAAACTAAAGCGATTCGGAAAGAGAATTTCGGTAACGCGAAACGGCTCAAAATGTTCAAAGAGATCATTAAAGCAGCCGGCCTTGAGTTTTCGGTAACTGGTAAGGTCGTTCGAATCTTGAAAAAAGTCGGTACGGATCTTTCGACGGTTGTCCGGAAAAACTTCAACATGAACGAGCTGACGATTGAAAAGAATATCGGCAACTTTATAACGTACAAAAAAGGTCTTGGGGCGTGGAAAGATGAAAACAACCACGACGCGGGCCGATATACGTCCGAATACGAGAGCCCACTCGCTCGGATCTATGGCCGTATCGAGGGCGAACCGGTAAGCGACGAACGCTATAAAGAGACTGGTAAGCTCTTGGAACGGCTAAAAAAAGAAGTTGACGAATCCTATTCGATCTCGGTCCAGCTTGGTATGGAAGATCTCACGCAGGCCGGTTATAAATACACACGGCCTCGCGCTGGTGACTATATCATGGCTATTAATGAGACGATCGGGTTCCGCGAAAAGATTCGTATCGTGTCTTACGAAAGCTCTTACGACGTCACAGGCCGGCTCTTGTCTCACAAGGTAACGTGTAACGATATTGGGACTGTACAGAAAGCGATCACGTCGGAAGGCTCGATCATGCGAAGTGTGTCCGAGTCTAAAGAGTACGCTGAAGGGGCTCTTGAGGTGGCTACACGGGCACTTGTCTCCGCAAACGGCAAGAATACCAACTATTACGGAGCCACGAAGCCCAAAGATGAGCCACGAGGGACGCTCCATGAAGGTGATCTCTTATACTTGACCGTGGGCGAGGAAACAGAACTCTATTATTGGTCAGGTACGGAATGGCTTCCAAAGATCCTCAAAGTCGATACAACGAAACTCGAAAAGCTATTCAACGACACGCAAGTATCAACGAACCAAGCGATCGCGCAAGCAAACGCAAAGGCAGAAGATGCCCTCAAGAAAGCCGGTACGCTACCAGATACGCCCACGTTGTCCGAGCAGATCAAACAGCAAATCTTATCTAGTCCAGACTTAAATCGCAAGGTAACAGAAACGCTCAATCAGACTGACGGCGGGGTTATCTATAATAAGATATACCAAAATATCAAAACCGACTTTGTTGAACAAAATGATATTAACCAAGTCTTGACTAGTTTCAGCGAGGAACTTCAAGCTCAAGTTGTAGAATTTAACAAACTCACAGAATCTAACAAGCTCTACGAACGTATCATTGGCAAGTCCGAAACAGACGCGCCAGATAAGCTCTCACGGCTGGTTATGGGCAGTCAGATCTTTCAGACTGAGGTCGGACAGTATGTTAATACTAATGGTGCTAACTTGTTAAATGGTTCGAAAGGGCCATTTAAACCAGACAAGAAGCCAGCTAACTTTGATAATAACATCTTGTATAAGGGCAACACGTCCATTTATATGGAGCAAGGACAAGAGTACATCGTTAGTGCTAAAACAGACGGTAACTTTACAGCCCATCACGATGGACTTAAAGAATCCGATAATGTAGTTCTTTGGATTATGGACAAGGATGTCAGAAATTATCAAATTGTATCGGACCTCAAGACTGGCACGACTGGAACCAAGATCACTTGGAATAAGCCAACAGGAACTTATCACTTGCGCGTTAACACCTATAGCAAAGATCCGGATAAGCTAAAATCGGTTTGGGACGTGAAAGTTGAAAAAGGATCAATCAAGTCTGATTACACATTATCACTAACCGACCAACTCAAGGCTGATCCGTTGATCGAAGCTACACGCACACAAATGAGCCTGCTAGCTGGGTCTTGGGCCGTAAAAAATCTCAACAGCAACGGTGATGTGCTGAACTCAATCAACGTACTGGCTGACGGCACGAACCGATTTGATGGACGGTTAACGCATATCACAGGACGAACCGTTATCGACGAGGCCGTGATAGATGGTGCGTCCATCAAGTCGTTATCGGCTAGTAAATTGTCTGGTGGTGAGGCTGACTTTGCTAAAATGAATGTGGTCAATTTTGACGCGAAGAATGTTACATCTGGAACATTTACGGGTCTCACGTTTAGAGGGGGTCTGATCGAAGGGTTAAACGGCAAGATGAATATCGATCTGCAAAACAGTCAAATAAACATATTGGATAATGACGCTGGGATCAATCGGCAAAAAGGAGGATTTCCATTTCAGTTTATCCGAATGATAAACGACACCCAGATCACTAATCGAGGGCCAAAGAATTCGACACTTACAATTTTAGGCTCAAATCGAGACGGAACCGGAATGTCGCATAACAGTGGTTTTGCTGGATTTAGATCATACAACAGCGCTACAGACTCACTATCAGAAATCGTCGGAGATCAAGTGCTTATTATGACTAACAACAGTAAACGTAGTCCGTGGATATTTAAAGCAGCAGATTATACTGATAACCATCACAGATTGATACCGTCAAACGAAAACGGTACTAGACACTCAATCGGACGAAGTGATAGACGACTGGGAGAAATCCATGTTGATGAAATCTATATAAATGGTGTCCGTCTTAAAATGGCACTTAAAGATATGCTCAACCGCATGGGCTATCGAGGTACAGGAAATTGGGGAGATAATGTAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7bddf182b1d286a709bc4be06ad7a658441ed3cc06eb6beb304e8ac9373b55db
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3073
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank