Protein

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Genbank accession
QDB71394.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFKPIGQVTLLITDEKTGQSRSITEYNTFTERGYQTALNLSNASGTNLLYSPFKEAERLYISSSTQTPNRYVTTVSGLIARCEPPTGATEVSWVEATDESPMYGELRGRLVFTGASRTFRTVVVGENAPSANAVGTTYLSTSAYAYVLFENNVTQGAFETIDIFYRVYFVNEVGLGLPKGGDLIRHIGRVLFGFEEKFIFQLSYLPSPRQTPSLTFLPNPNNYNFWVSDSLMNISATPDGLNNGLSVNRDISRLLSNLEFKLGGNSIGLNAFTGRVINTLAVGDLDNTGLTAVAVQLVNPSRNPIQTSWGKKNNAVSAFYDASWTANGSGKMIPSGSWTGYYPDMYRIRIVDSGNIGVATYRLERQRFTHYQGNSWSQIRDVIPFLGYRYSRIPFTHSHGHQNHLNYKVFNDRTLIRWDSTGVTMIDILNGVYKNFDVNNDTTVSNANLPVTNIKQLEIFNGKIYVACSDTGLWEINPAGGTNSIVRLVTTPVYAVASAFNQTALDLFIVTNNGITSLSSNWSTFFNPSNANITSMGWVNVFALVGCTSSNRPNAEFVIHLRNGSNFALVWWSRSIGNGSANSVTFNTTVTGGIIPQEKAVQVSTFGDFWIFHAVNTSSFRANSFGSQATQNSNYNPNSDNNIKRIGFFDENNFYYARQEFRSGIYVFISVRNNSVVEVQSVDKLTPVLPDTSLYLGRNLFFVGGTISVCSLEWESWGWNGSAWVKDHSGVKTTHADSQPILDGLSISFQNGQAGVSFQSQDFYTIPVCYGVLGDNARYIEHYITFSASEISQGNI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 88048,16550 Da
isoelectric point:6,44079
aromaticity:0,12437
hydropathy:-0,17839

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB71394.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,4086
Central domain 215 451 238 0,6281
C-terminal 452 796 344 0,7300
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-451
C-terminal
452-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Microcystis phage Mic1
[NCBI] 		2587456 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cyanobacteria
[NCBI] 		1117 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB71394.1 [NCBI]
Genbank nucleotide accession
MN013189 [NCBI]
CDS location
range 26062 -> 28452
strand -
CDS
ATGTTTAAACCTATTGGGCAAGTCACTCTTTTAATAACGGATGAGAAAACAGGACAATCACGTTCTATTACAGAATATAACACTTTTACAGAAAGAGGTTATCAAACAGCTTTAAATCTCTCAAATGCGTCTGGTACTAATCTACTGTACTCACCTTTTAAGGAAGCAGAGAGATTATATATCTCTTCTTCTACACAGACCCCTAATAGATATGTTACAACTGTCAGTGGTTTAATTGCACGCTGTGAGCCTCCGACTGGTGCTACAGAAGTGTCATGGGTAGAGGCTACTGATGAATCACCCATGTACGGTGAATTACGAGGACGGTTAGTTTTTACAGGGGCTTCCAGAACTTTCCGTACTGTTGTGGTTGGTGAGAATGCACCAAGTGCTAATGCTGTAGGTACTACATATCTTTCAACTTCTGCTTACGCTTATGTTCTTTTTGAAAATAACGTGACACAAGGTGCTTTTGAAACTATTGACATTTTTTATAGAGTTTATTTTGTTAATGAGGTTGGCTTAGGATTGCCTAAAGGTGGTGATTTAATCCGACATATTGGTAGAGTTCTTTTTGGATTTGAAGAAAAGTTTATATTTCAATTATCGTATCTACCAAGTCCTCGTCAAACCCCTAGTTTAACATTTTTACCTAACCCAAATAATTATAATTTTTGGGTCTCGGATTCTTTAATGAATATTTCGGCAACACCTGATGGCTTAAATAATGGGCTATCTGTTAATAGAGACATTTCACGACTGTTATCGAATTTAGAGTTTAAATTAGGTGGTAATTCAATAGGATTAAATGCTTTTACTGGTAGAGTTATAAACACATTAGCTGTTGGTGACTTGGATAATACTGGATTAACGGCTGTTGCAGTTCAATTAGTGAATCCCTCTCGCAATCCTATTCAAACTTCTTGGGGTAAAAAAAATAATGCCGTATCTGCTTTTTATGATGCTTCATGGACAGCTAATGGTTCAGGAAAAATGATACCATCAGGTTCATGGACTGGCTATTATCCCGATATGTATAGAATACGAATTGTAGATTCTGGGAATATTGGAGTTGCTACTTATCGTTTAGAGCGTCAACGTTTTACCCATTATCAAGGTAATTCTTGGTCGCAAATACGAGATGTAATTCCCTTTTTAGGTTATAGGTATTCTCGGATACCTTTTACTCATTCTCACGGACATCAAAATCATCTTAACTACAAAGTTTTTAATGATAGAACATTAATACGTTGGGATTCTACAGGAGTCACAATGATTGACATTTTAAATGGAGTTTACAAAAATTTTGATGTCAATAATGATACTACTGTTTCTAATGCTAATCTTCCTGTTACCAATATTAAACAGTTAGAAATATTTAACGGAAAAATTTATGTGGCTTGTTCTGACACAGGATTGTGGGAAATTAACCCGGCTGGGGGTACTAATTCTATTGTTAGACTGGTAACTACACCAGTTTATGCTGTGGCTTCCGCTTTTAATCAAACAGCCTTAGACCTATTTATTGTTACTAATAACGGAATTACAAGTTTATCCTCTAACTGGTCAACTTTTTTTAACCCCTCTAATGCTAATATTACATCTATGGGTTGGGTTAATGTTTTCGCATTAGTGGGTTGTACTTCTTCTAATAGACCAAATGCTGAATTTGTTATTCATTTGCGTAATGGTAGCAATTTTGCGTTAGTTTGGTGGTCTAGGTCTATAGGGAATGGTAGTGCAAATTCTGTTACGTTCAATACAACTGTCACAGGTGGTATTATACCTCAAGAAAAAGCTGTTCAAGTTTCTACTTTTGGAGATTTTTGGATTTTCCATGCTGTTAATACTTCTTCTTTTCGTGCTAATTCTTTTGGTTCTCAGGCTACACAAAATAGTAATTATAATCCAAATAGCGACAATAATATCAAGCGTATTGGGTTTTTTGACGAAAATAATTTTTATTATGCTAGACAGGAATTTAGAAGTGGAATTTATGTTTTTATTTCTGTAAGAAATAATTCTGTTGTTGAAGTTCAAAGTGTTGATAAGTTAACTCCAGTGCTTCCTGATACCTCATTGTATTTAGGCAGAAATCTTTTTTTTGTTGGGGGAACTATTAGTGTTTGTTCTCTTGAGTGGGAATCTTGGGGTTGGAATGGTTCTGCTTGGGTTAAAGATCATAGTGGCGTTAAAACAACCCACGCCGATTCTCAACCTATTCTTGATGGTCTATCAATTAGTTTTCAAAATGGTCAAGCTGGTGTTTCTTTTCAATCTCAGGACTTTTATACAATCCCTGTTTGTTATGGTGTTTTAGGAGATAATGCCCGTTATATAGAACACTATATTACTTTTTCGGCTTCTGAAATTTCTCAAGGAAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
599d27a978311d7a2c5f4034acb929544e2fb1edc5084f36ec641ad93e1c7310
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of the freshwater cyanosiphophage Mic1 reveals an ancestor of mitochondrial DNA polymerase gamma Yang,F., Jin,H., Wang,X.Q., Zhang,J., Jiang,Y.L., Cui,N., Chen,Y.X., Li,W.F. and Zhou,C.Z. 2020-04-08 — GenBank