Protein

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Genbank accession
WNV49472.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVDTCNINGVCGTGDWNGPKPGDPNMNDLLLKATPAFGGIDIEFTWPTTNPGAVGTTRLFRSTDANFAGATIRAFVNGNFYFDKTDPGSKVDQRYYYWIQLVSINGTDGDIIGPATATARPLIEQMIEQLTGEIDNGLLSQELRKEIAQIELNKLGITQEEIERAKNDDALGVRLTQIDAKMDQNTAILQEEVRARVTADSSLVQTVNTMYADFNGNIAAIQQENTALATKVNALASSVTTINATVNGDSASGKVGLVAEVQTLDGKVTQIGARWTATVDVNGLVGGFGVYNDGRTVEAGFNVDRFWIGRPGTPKNPGSYPFIIDNNIVYIKEAAIQKLTFDKLRAQDGSFIVQNGKIQADYIEAKDIVVNNIQSDNYQPGVQGWAFRPNGIMEINGTAGTGRMTINNATIKVFDQAGKLRVHIGNLQA
Physico‐chemical
properties
protein length:429 AA
molecular weight: 46361,45190 Da
isoelectric point:4,80400
aromaticity:0,07459
hydropathy:-0,24662

Domains

Domains [InterPro]
DC_1382
STR
25–429
DC_1382
IPR013783
STR
31–112
IPR013783 Coil IPR015406
IPR053171
Unmapped
149–413
IPR053171
WNV49472.1
1 429
Architecture
STR
STR 25-429
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage L15
[NCBI] 		3046822 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV49472.1 [NCBI]
Genbank nucleotide accession
OQ992559.1 [NCBI]
CDS location
range 22162 -> 23451
strand +
CDS
ATGGTAGACACTTGCAACATCAATGGGGTCTGCGGAACCGGGGACTGGAATGGTCCTAAGCCCGGTGACCCCAACATGAATGATCTGCTGCTGAAGGCAACACCTGCCTTCGGTGGTATCGACATTGAGTTCACTTGGCCAACTACGAACCCAGGTGCAGTTGGCACTACTCGACTGTTCCGAAGCACTGACGCTAACTTCGCTGGTGCAACTATCCGTGCCTTCGTCAACGGTAACTTCTACTTCGACAAGACAGACCCTGGCTCCAAGGTAGATCAACGCTACTACTATTGGATTCAGTTGGTTTCGATCAACGGCACTGATGGGGACATCATTGGTCCAGCCACAGCTACTGCTCGTCCACTCATCGAGCAGATGATTGAGCAGCTTACTGGCGAGATCGACAATGGGTTGTTGTCTCAAGAGCTTCGCAAAGAAATCGCTCAGATCGAACTGAACAAACTGGGGATCACCCAGGAAGAGATTGAACGAGCCAAGAACGATGATGCTCTTGGTGTTCGTCTCACTCAGATCGATGCGAAGATGGATCAGAATACTGCCATCTTGCAGGAAGAGGTTCGTGCTCGTGTAACTGCTGACAGTTCTCTGGTTCAGACAGTCAACACTATGTACGCAGACTTCAACGGGAACATTGCAGCAATCCAACAGGAGAACACTGCACTGGCTACCAAGGTGAATGCCTTGGCTTCGTCTGTGACCACGATCAACGCCACGGTCAACGGTGACTCGGCCTCTGGTAAGGTTGGCTTGGTTGCTGAGGTACAGACTCTGGATGGCAAGGTCACCCAGATCGGTGCCCGCTGGACTGCGACTGTTGATGTGAATGGTTTGGTCGGTGGCTTCGGTGTCTACAACGATGGCCGGACTGTTGAAGCTGGCTTCAACGTAGACCGCTTCTGGATCGGTCGTCCTGGCACTCCGAAGAACCCAGGCAGTTACCCGTTCATCATCGACAACAACATCGTCTACATCAAGGAAGCTGCCATCCAGAAGTTGACCTTCGACAAGCTCAGGGCACAGGATGGCAGCTTCATTGTTCAGAACGGTAAGATCCAGGCTGACTACATCGAAGCCAAGGATATCGTGGTGAACAACATCCAGTCGGACAACTACCAACCAGGTGTCCAAGGCTGGGCATTCCGTCCCAACGGGATCATGGAAATCAACGGTACGGCTGGTACTGGCCGTATGACTATCAACAACGCCACCATCAAGGTGTTTGACCAAGCAGGTAAACTCCGGGTGCACATTGGGAACTTGCAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fb4580ac76f0e3e67715f7f268b957f01980d08bb2d57b0eeba37655eb3acf5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo phages are active against extensively-drug-resistant eyedrop-associated Pseudomonas aeruginosa infections Cobian Guemes,A.G., Ghatbale,P., Blanc,A., Morgan,C., Garcia,A., Leonard,J., Huang,L., Kovalick,G., Proost,M., Chiu,M., Kuo,P., Oh,J., Karthikeyan,S., Knight,R., Pogliano,J., Schooley,R. and Pride,D. 2024-10-29 — GenBank