Protein

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Genbank accession
YP_009821690.1 [GenBank]
Protein name
head closure Hc3
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQPERGQVVNLPIVFGDGRSRTDFDWITRLPENMLAIARQIKGGNGYMRMMPGLRKSLDVAGISRGVHWNTVSNTAYRVMGGKLYNNGNPIADISAEDRTPMAHSRTSQGIVSQNQLILIGYDGTRKTFANWPRDSGTDVDNPQYTWGDINDVCHLRQRYIFSVKGSDTFWISDLTDESHPDKTAPAYRAESMPDGIVAIRAWRDYVLCFGTASIEFFGLTGDDQNVYASQPSYTVEAGTLGRETVAQYLNSFAFITSPFVGEYTIALMNPGGGDWSDLASIQIKKILSAYSVAQLQDARLEAVSFESHKLLIVHLPDQTLVYDHPVSQAQGVPVWSIIKTGVQNASGPHRAIDYCNEGSKITVGDKREAILGEFDMTTCSQYGADQEIVLYTPLMPFENMILSDFEIDASVGGDSVTSRMWLSATEDGSAFGQEILIDYNTPQQWLKRVILKKIGRCRTALAFKIRTVGATPATLSRARVRVS
Physico‐chemical
properties
protein length:485 AA
molecular weight: 53700,04800 Da
isoelectric point:5,82153
aromaticity:0,09278
hydropathy:-0,25567

Domains

Domains [InterPro]
IPR021098
STR
11–484
IPR021098
YP_009821690.1
1 485
Architecture
STR
STR 11-484 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009821690.1
1 485
Domain Start End Length (AA) Confidence
N-terminal 1 91 91 0,6646
Central domain 92 290 200 0,0893
C-terminal 291 485 194 0,5297
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-91
Central
92-290
C-terminal
291-485

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Sortsne
[NCBI] 		2562456 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009821690.1 [NCBI]
Genbank nucleotide accession
NC_048178 [NCBI]
CDS location
range 25650 -> 27107
strand -
CDS
ATGAAACAACCAGAACGCGGACAGGTCGTGAATTTGCCGATTGTTTTCGGTGATGGCCGCAGCCGGACGGACTTCGACTGGATCACCCGCTTACCGGAGAACATGCTGGCGATCGCGCGCCAGATTAAGGGCGGCAACGGCTACATGCGCATGATGCCCGGCCTCCGTAAGTCGCTGGACGTTGCGGGGATCTCTCGTGGCGTCCACTGGAACACCGTCTCAAACACGGCCTACCGCGTGATGGGCGGCAAGCTGTACAACAACGGCAACCCGATCGCGGATATCTCAGCCGAAGATCGAACCCCGATGGCGCATAGCCGCACCAGCCAGGGGATCGTCTCCCAAAATCAGCTTATCCTGATCGGCTATGACGGGACCCGTAAAACCTTCGCCAACTGGCCGCGCGACTCCGGGACGGACGTCGATAACCCACAATACACGTGGGGCGATATTAACGACGTGTGCCACCTCCGACAGCGCTACATTTTCAGCGTGAAGGGATCGGACACCTTCTGGATCTCCGACCTTACCGACGAGAGCCACCCGGACAAGACGGCCCCGGCGTATCGTGCGGAGTCCATGCCGGACGGCATCGTGGCGATCAGGGCGTGGCGCGATTATGTCCTGTGCTTCGGGACCGCCTCGATCGAGTTCTTCGGCCTGACCGGGGACGATCAGAACGTCTACGCCAGCCAGCCGTCCTATACGGTCGAAGCCGGGACGCTGGGCCGTGAAACGGTGGCGCAGTACCTGAACAGCTTCGCCTTTATCACGTCGCCTTTCGTGGGCGAATACACGATCGCGCTGATGAACCCCGGCGGCGGCGACTGGTCTGATCTGGCCTCGATCCAGATTAAGAAGATCCTCTCCGCGTACTCCGTGGCCCAATTACAGGACGCCCGACTGGAGGCTGTGAGCTTTGAAAGCCATAAACTTCTTATTGTCCACTTACCGGACCAGACGCTCGTCTACGATCACCCCGTTAGCCAGGCGCAAGGCGTCCCGGTATGGTCGATTATTAAAACGGGCGTACAGAACGCCAGCGGCCCGCACCGCGCGATCGACTACTGCAACGAAGGCAGCAAGATCACCGTAGGCGACAAGCGCGAGGCCATTCTGGGCGAGTTCGATATGACCACTTGCTCCCAGTACGGGGCCGACCAGGAGATCGTCCTCTATACGCCGCTTATGCCGTTTGAGAACATGATCCTGTCCGACTTCGAGATCGACGCGAGCGTGGGCGGCGACAGCGTTACGAGCCGGATGTGGCTATCCGCCACCGAGGACGGGAGCGCGTTCGGACAGGAGATCCTGATCGACTACAACACGCCGCAGCAGTGGCTAAAGCGCGTTATCCTCAAGAAGATCGGGCGATGCCGGACGGCTCTCGCGTTCAAAATCCGCACCGTCGGCGCAACCCCGGCGACTCTCTCGCGCGCTCGTGTCCGTGTGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
13b72fcd9ada654dc04d1b360f369f9a841a45d400641db6303587fa348a6857
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8363
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50