Protein

View in Explore
Genbank accession
WYA77461.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,91
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVGEIQISALPQAALPIDLSDIFHLKQGIEDKRCTLEQLLAPHSSLRNNPHGVTKTQIGLDNVINALQLVAANNLSDIVNVAEARKNLQIMSSAEVNSLIQQHINDKSNPHNTTKAQVGLSNVQNWTTSNLYNEDADKYATARAVNNLYKAVQASYPVGTIHLSMNPANPSTYLICGGTWELVSKGRALVGYDSDSRPVGSTFGSQTTALTANNIPAHTHSVYVTGGGHTHGATASISAFDYGTKGTTTFDYGTKTVSTYDYGNRTTSAAGLTQTTFINRGYADGGWRGLSVEGASYDPRATLTTANNHTHSVAIGAHNHTVGIGAHSHTVAIGSHNHSATVTVTGAGEHSHSGTTGTTGSGQAFSVEQPSFVLYVWQRTA
Physico‐chemical
properties
protein length:382 AA
molecular weight: 40366,96950 Da
isoelectric point:6,69065
aromaticity:0,06545
hydropathy:-0,30445

Domains

Domains [InterPro]
DC_1039
STR
1–382
DC_1039
IPR051934
Unmapped
95–346
IPR051934
SSF88874
STR
151–283
SSF88874
IPR053827
ATT
154–261
IPR053827
WYA77461.1
1 382
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-261 | STR 262-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA77461.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,5928
Central domain 235 371 138 0,0574
C-terminal 372 382 10 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-371
C-terminal
372-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_BL
[NCBI] 		3135017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA77461.1 [NCBI]
Genbank nucleotide accession
PP481222.1 [NCBI]
CDS location
range 51440 -> 52588
strand +
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCAGCCTTACCAATTGACCTTAGTGATATCTTCCATCTTAAGCAGGGTATTGAGGATAAGAGATGTACTCTTGAGCAATTACTTGCTCCACACTCAAGCCTAAGAAATAACCCTCATGGTGTTACTAAAACACAAATTGGTTTAGATAATGTTATTAATGCTCTTCAGTTAGTTGCTGCAAATAACTTATCAGATATTGTTAATGTAGCTGAGGCAAGAAAAAATCTACAGATTATGTCTTCAGCAGAGGTTAATAGTCTTATTCAACAGCATATTAATGACAAGAGTAACCCACACAATACAACTAAGGCGCAGGTTGGTTTAAGTAATGTCCAGAACTGGACAACATCTAACCTTTATAATGAAGATGCAGATAAGTATGCTACAGCAAGAGCAGTAAATAACTTGTACAAGGCTGTTCAGGCTTCTTATCCAGTAGGTACTATCCATCTCTCTATGAATCCTGCAAACCCCTCTACATATTTAATTTGTGGGGGTACTTGGGAGTTAGTCTCAAAAGGGAGAGCACTTGTAGGTTATGATAGTGATTCTAGGCCAGTTGGTTCAACGTTTGGTTCACAGACTACTGCACTGACGGCTAATAACATTCCTGCACATACCCACTCAGTGTACGTCACTGGTGGTGGTCATACTCATGGTGCAACGGCCTCTATCAGTGCTTTTGACTATGGCACTAAAGGGACTACAACGTTTGACTATGGAACCAAGACTGTATCTACTTATGACTATGGCAACAGAACAACAAGTGCTGCTGGCTTAACACAAACAACATTCATTAACCGTGGCTATGCTGATGGTGGCTGGAGAGGTTTATCGGTTGAGGGGGCAAGCTATGACCCAAGAGCTACGCTGACAACAGCTAACAACCACACTCACTCTGTAGCAATTGGTGCGCATAATCATACGGTTGGTATTGGTGCTCACAGCCATACTGTTGCAATTGGTTCTCACAACCACTCAGCAACAGTAACAGTAACCGGAGCAGGTGAGCATTCTCACTCTGGCACAACTGGTACAACTGGTTCTGGTCAAGCATTTAGTGTTGAACAGCCATCTTTCGTATTGTATGTATGGCAGAGAACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0da5bea80c8e1c5cd3ef06f8a6cac8658cba9e222c51081024809745a17edff8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of phages and their application in the control of antibiotic resistant bacteria Wang,Y.-Z., Xue,B.-N., Jin,M.-K., Hu,S.-L., Fortuna,K., Lavigine,R., Ye,M. and Su,J.-Q. 2024 — GenBank